Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06959 ATGATGTACGATACAATATTTGCCAAAAGCTTTAGTCGTTATGAGCAGAAAAAGTTGGGATATGGAGCATTTGTGGGCTTCTTGCTCATCCTTTTGAGTCTTTGCACTGTCTTTAAGCCTTATTTGGGTCCTATACATGATTTGAACCTGAAGCTCTCCCTCACTGTTGACACCAAAATGCTGATGGTCAATGACACCAGCAGCTCTCCACAGATACCACAAGGTAAGAAAAGAAACTCATTTCATTCTGTATTGTATGTTTGTATCTCTATCTCAATAAGGTTACTTGACACACTGTGGTTTAGCCATGCAAATACCTTCCCTGTGTGTTGTGTTGAGGCAAATGATTCTGACAGCCCTGTTTTTATTTGTGATGATTCTTTGGTTAAAGACATTGTGGCCGAAATTCTTGTTGAAGACACTAGAAGCTCTCCACCAAAAGCTCAAGCTGAAATTGTTGTACCAAAGAGTCCTGTCAATGACACTGAAAGCTCTCCACAAATTGCTAAAGTTAAAGATAATGTAATAAAAACTCTCATCAATGACACCAGCAGCTCTCCACCAAAAGCTGAAGCTGAAAGCATTGTGTCAAAGATTCTAGTCAATGACACCAAAAGCTCCCCCAAAAAAGCTGAAGCTGAAGGGACAGAAACAAAGAAAGTGGAGCAGCTATGCATTTCAGAAAAAAGAACAGAATATTGCCAACCCCAGGGAGATGTCCGAGTACATGGAAAATCCTCCTCTGTTTACTCTGTTTCACCTGAAACAAACATGTTGGCAGAAAACATGTCATGGAGTATAAGGCCTTATGCAAGGAAAGGGGATACACATGCAATGAATAGTGTAAGAGAATGGTCAGTGAAGCCAGTAAAAGAAAGCCAGCAAGTCCCACAATGCACCCAAAATCACAGCATTCCAGCAGTATTATTTTCTACTGCAGGGTATACTGGCAACCACTTCCATGAGTTCACTGACATTGTTATTCCACTGTTTTTGACTTCTAAACAATTTAATGGAGAAGTTCAATTTATCATTACTGATAAAAGGCCTTGGTGGATTTTAAAGCACCAACCATTTCTTAAAAAGCTATCCAACTATGAGATCATGGACATTGATAGAGATGATGAAGTGCATTGCTTCCCAAGGGTGAATGTGGGGCTCAAAAGGTATCACAAAGAGCTAAGCATTGACCCTCAAAAGTATTCCTATTCTATGAAGGATTTCAGGGATTTTTTGAGAAGTTCCTATTTATTGAAGAGAGTGAAAGCAATCAAACTCAGAGAAGGTCAACGTAAGAAGCCCAGGCTCCTGATTCTTTCAAGGAAAAGATCAAGATCCTTCACAAATACAGCTCAAATAGCAAAAATGGCTAAAGGCTTGGGATTCAATGTCATTGTGATTGAAGCAGGGGGGAGCATGTCAAACTTTGCAAATGTTGTGAATTCTTGTGATGTGTTATTGGGAGTTCATGGTGCTGGTCTCACCAACATACTTTTCCTTCCAGAAAATGCAGTTTTGATTCAAGTTGTGCCTTATGGAGGGGTGGAATGGCTTGCCACAAATGACTTTGCAAAGCCCTCAGAGGATATGAACATAAAGTACTTGGAATACAAAATAAGGTTGGAAGAAAGCACTCTTATACAACAATACCCATTGGACCATATGGTTTTAAAGGATCCTCCATCAATAGGGAAACTAGGATGGGAAGCATTTAGGTCTGTGTATTTGGACAAACAAAATGTAAAGCTTGATGTTAATAGGTTTAGGCCAACATTGCAGAAAGCCCTTGAGCTATTGCATCAATAG 1806 0.397 MMYDTIFAKSFSRYEQKKLGYGAFVGFLLILLSLCTVFKPYLGPIHDLNLKLSLTVDTKMLMVNDTSSSPQIPQGKKRNSFHSVLYVCISISIRLLDTLWFSHANTFPVCCVEANDSDSPVFICDDSLVKDIVAEILVEDTRSSPPKAQAEIVVPKSPVNDTESSPQIAKVKDNVIKTLINDTSSSPPKAEAESIVSKILVNDTKSSPKKAEAEGTETKKVEQLCISEKRTEYCQPQGDVRVHGKSSSVYSVSPETNMLAENMSWSIRPYARKGDTHAMNSVREWSVKPVKESQQVPQCTQNHSIPAVLFSTAGYTGNHFHEFTDIVIPLFLTSKQFNGEVQFIITDKRPWWILKHQPFLKKLSNYEIMDIDRDDEVHCFPRVNVGLKRYHKELSIDPQKYSYSMKDFRDFLRSSYLLKRVKAIKLREGQRKKPRLLILSRKRSRSFTNTAQIAKMAKGLGFNVIVIEAGGSMSNFANVVNSCDVLLGVHGAGLTNILFLPENAVLIQVVPYGGVEWLATNDFAKPSEDMNIKYLEYKIRLEESTLIQQYPLDHMVLKDPPSIGKLGWEAFRSVYLDKQNVKLDVNRFRPTLQKALELLHQ. 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06959 601 Pfam Glycosyltransferase 61 405 507 IPR007657 GO:0016757
Seca12g06959 601 PANTHER GLYCOSYLTRANSFERASE 18 599 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06959 Seca-Chr12 161551048 161554546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06959 - - lja:Lj4g3v3114090.1 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06959 12 161551048 161554546 Seca12g06959 12 161551048 161554546 ECH