Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06928 ATGGAGGAAGATACGGTTAAGAACGAGGAAGAAGAATTCAACACTGGACCACTATCCGTCCTGATGATGAGTGTTAAAAATAATACTCAGGTACTGATAAATTGTCGAAACAATAAAAAGCTTCTGGGTCGAGTCAGGGCTTTTGATAGGCACTGTAACATGGTTCTTGAAAATGTCCGGGAAATGTGGACTGAGGTACCAAAGACGGGTAAGGGAAAGAAGAAGGCTCAGCCAGTCAACAAGGATAGATTCATCAGCAAAATGTTTCTCAGAGGTGATTCTGTAATCATCGTGCTGAGGAACCCCAAATAA 312 0.4199 MEEDTVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06928 103 FunFam Small nuclear ribonucleoprotein Sm D2 11 103 - -
Seca12g06928 103 SUPERFAMILY Sm-like ribonucleoproteins 16 101 IPR010920 -
Seca12g06928 103 Gene3D - 11 103 - -
Seca12g06928 103 ProSiteProfiles Sm domain profile. 18 103 IPR047575 GO:0003723
Seca12g06928 103 Pfam LSM domain 24 98 IPR001163 -
Seca12g06928 103 CDD Sm_D2 13 102 IPR027248 GO:0008380|GO:0030532
Seca12g06928 103 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 2 103 IPR027248 GO:0008380|GO:0030532
Seca12g06928 103 SMART Sm3 21 100 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06928 Seca-Chr12 161261068 161265493 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06928 K11096 - csv:101206064 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06928 12 161261068 161265493 Seca12g06928 12 161261068 161265493 ECH