Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06873 ATGGAAGGTGCAGAGGAGGAGCTAGAGAGAAGAAGCAATTTTCTAAAAAGCTTGATACAGAAGAAGAAAGCCATAGAGCAACAAGAGCAGCATGACCACATTCAAAATAAGGTTCGAGTTAGAGCATGTGACATGCCTCTTCCTCTGCAGAACCGTGCCTTTCGTTGTGCACGTGATCTCCTTGATTCTATGCCAGGAAACAAGCTTGACAGTAAACGCATCGCCTTGACCCTTAAGAAGGAATTTGATTCTTCCTATGGTCCAGCTTGGCACTGCATTGTTGGTACTAGCTTTGGCTCCTATGTTACACATTCTCTTGGCGGTTTCTTGTATTTTTCCATTGATAAGGTTTATATCCTTCTCTTCAAGACAGCAGTTGAACCATTAGACCATTGA 396 0.4293 MEGAEEELERRSNFLKSLIQKKKAIEQQEQHDHIQNKVRVRACDMPLPLQNRAFRCARDLLDSMPGNKLDSKRIALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDH. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06873 131 SMART Dynein_light_2 33 124 IPR001372 GO:0007017|GO:0030286
Seca12g06873 131 SUPERFAMILY DLC 34 124 IPR037177 GO:0007017|GO:0030286
Seca12g06873 131 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 22 125 IPR037177 GO:0007017|GO:0030286
Seca12g06873 131 Pfam Dynein light chain type 1 37 124 IPR001372 GO:0007017|GO:0030286
Seca12g06873 131 CDD DLC-like_DYNLL1_DYNLL2 37 124 - -
Seca12g06873 131 PANTHER DYNEIN LIGHT CHAIN 36 124 IPR001372 GO:0007017|GO:0030286
Seca12g06873 131 FunFam Dynein light chain 26 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06873 Seca-Chr12 160753370 160755279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06873 K10418 - gmx:100805980 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06873 12 160753370 160755279 Seca12g06873 12 160753370 160755279 ECH