Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06872 ATGTATCCACCACCAGAAGAGGAAACAAAACCAGGCCAGTACTCCGCGGCCACCGGTTTCCCAGTATCGGCGGCGAGCTACAGCACCACAACAGGGTACTCCTCCGCCGTCTACAATCAACCACCTCCACCGCCCAAACCTCTTGTTGATTGGCAAACTGGCCTCTGTGACTGCTTCTCCGACTGTAAGAACTCATGTGGGGCTAGCGGGGCTCTGTACACGCTTATTTGTTGTGTGATTGGCTGTGGTTGCTTATACTCTTGCTTCTACCGTTGCAAGATGAGACAACAGTACGGTTTGAAGGGAAATGATTGTTGTGATTGCTTGATTCATTGCTTCTGCGAGCCCTGTGCCTTGTGCCAAGAATACCGTGAGCTTGATTCAACATGGTCATTGATATGGTTAGGGTGGCATGGAAATGTTGAGCAACGGAGCCGGGGAGTAGCCATGGCTGCAACAGCTCCGATAGTCGAACAGGGAATGAGCCTCATGCATCCACCACCCTCACAACCACCGTACAATCAGCCAGCTGCCACTGGTTTTCCGGTGACTTACCCTAAAGGAGAGGAATCAGAGTGGTCCTCTGGCCTCTTTGACTGCTTCGACAACCCCAAAAACTGTTTCATAACGTGTTGCTGTCCATGTATCACCTTTGGCCAAATTGCAGAGGTTGTTGACAAGGGATCAACTTCATGTGGTGCTAGTGGGGCTCTGTATACGCTGATAAGTTGTGTGAGTGGTTGTGGGTGGATATACTCTTGCTTCTACCGTTCCAAGTTGAGAGAGCAATACAGGCTGAAGGAGAGCCCTTGTGCTGATTGCTTAGTTCATTGCTGCTGCGAGCCCTGTGCCCTCTGTCAAGAATACCGTGAACTTGAACACCGTGGATTTGACATGCCCATTGGGTGGCATGGAAATGTCGAGCAAGGGAGAGGGGGAATAGCCATGGCTCCAACAGTTGAACGCATGAATCGTTGA 978 0.5082 MYPPPEEETKPGQYSAATGFPVSAASYSTTTGYSSAVYNQPPPPPKPLVDWQTGLCDCFSDCKNSCGASGALYTLICCVIGCGCLYSCFYRCKMRQQYGLKGNDCCDCLIHCFCEPCALCQEYRELDSTWSLIWLGWHGNVEQRSRGVAMAATAPIVEQGMSLMHPPPSQPPYNQPAATGFPVTYPKGEESEWSSGLFDCFDNPKNCFITCCCPCITFGQIAEVVDKGSTSCGASGALYTLISCVSGCGWIYSCFYRSKLREQYRLKESPCADCLVHCCCEPCALCQEYRELEHRGFDMPIGWHGNVEQGRGGIAMAPTVERMNR. 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06872 325 PANTHER DUF614 FAMILY PROTEIN-RELATED 64 129 IPR006461 -
Seca12g06872 325 Pfam PLAC8 family 51 125 IPR006461 -
Seca12g06872 325 Pfam PLAC8 family 193 291 IPR006461 -
Seca12g06872 325 NCBIfam uncharacterized Cys-rich domain 191 294 IPR006461 -
Seca12g06872 325 NCBIfam uncharacterized Cys-rich domain 63 127 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06872 Seca-Chr12 160742265 160748572 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06872 - - gmx:100818949 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06872 12 160742265 160748572 Seca12g06872 12 160742265 160748572 ECH