Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06846 ATGCCATGTCCCAAAGAAGAAGCTCTTGTTAGACTCTTCAACAATGTCTCAAGCTCTTTTCAGCTTCTCTTCCTCCTCCTCTTCTCCTCTGCCATTTTTCTTCTCACATTCTTAACCTTCACTGGCAGATTCCCCTTAATCCAAAGAGATCAACAATATGAATATGAGTTTTCTGAGGATGAAGAACAAGAAGAAACTCAACAAGGGTACTCTTGTGGTGTTGATTCTACTGAGAGAGCAAACATCAAATGTGGTAGGGAACCCCTTTTGTTTGTGCATGATGAGGAACCTCAGAGGACTCATTCTTATTCTGAAAAATTCATAAGCCCCAGGGAGAGCTTGATTGAAGAGTCAGAAGAAAGCCATTATTCTGAAACATTGTTGTCTGTTCATAACTCACCACAAGTTTCTGACTTTGAAGATGATGAAGCAGAAGCAGTTGAAGAAGACTTTCCAGCAAGAGATGCTGATTCTGTTTCAAATTCTGTCCAAGTTGAAAGCAGGCCCACCTCTCCCATCAACCTGAACCTATACAAAAAGAACAAAAACCTTCATGATGATCATGTTGGTCTTGGAATTATCAAAAATAAGAAGGTGAAGGAGGCAAACCTCACAAGGGATGAGAGATTCTTTGTTTATGCTTCTACCAAGTTAAAGAGTAAGAAGTTGATTGTTAAAGAGAAGGATGATAACTCTACAAGCTCCTCTGAATGGGGGAGCTCCATCAATTGCAGGGATTATGAGAGTGAAGATGCATTTTCTTCCTCATCTAGAAGAAGTTGCCCCAAGTGGGAATCATATACTTTGTTCCAAAAATATGATGAAGAAAAGGCATTCTTAGACAGAATTAGTACACAGAAACTTCATGAAACTGGATCCATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGCAAACAAGTTTTCAACTGCAAACAAAAGGCCTGCTGATGTTGGTCACAACCCATATTCTGAACTAGAGGCTGCATATGTTGCACAAATTTGTTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCTTCACACCATGATCTTGATACCGGTTGCCCTGCCACCATTGCACAGCAATTCCAGCAATTTCAGGTTTTGTTACAGAGATACATAGAGAATGAGCCTTATGAGCATGGCAGGAGACCTGAGATCTATGCTAGAATGAGGCTTTTGGCACCAAAATTGCTCCTAGTGCCAGAATATCAAGGTTTGAAAATTAGTAAATCACTTTCTCTTCTAGAAGTAAATGTCATGTCAAAAACAATACCATGGGGTTGGAGTGCATGGTATATGATTAGTAAGTATTTTTGGCAAGACAGAACAAGATATAGAAGAACAACTATGTATCAATGTGTTTGGTTTACATCATATAACATGGTATATGTTTGGTTTACACTTGGGTAG 1437 0.3918 MPCPKEEALVRLFNNVSSSFQLLFLLLFSSAIFLLTFLTFTGRFPLIQRDQQYEYEFSEDEEQEETQQGYSCGVDSTERANIKCGREPLLFVHDEEPQRTHSYSEKFISPRESLIEESEESHYSETLLSVHNSPQVSDFEDDEAEAVEEDFPARDADSVSNSVQVESRPTSPINLNLYKKNKNLHDDHVGLGIIKNKKVKEANLTRDERFFVYASTKLKSKKLIVKEKDDNSTSSSEWGSSINCRDYESEDAFSSSSRRSCPKWESYTLFQKYDEEKAFLDRISTQKLHETGSIQMSPRSMSERIANKFSTANKRPADVGHNPYSELEAAYVAQICLTWEALSWNYKNFRSKHASHHDLDTGCPATIAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQGLKISKSLSLLEVNVMSKTIPWGWSAWYMISKYFWQDRTRYRRTTMYQCVWFTSYNMVYVWFTLG. 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06846 478 PANTHER DNA LIGASE (DUF1666)-RELATED 12 416 - -
Seca12g06846 478 Pfam Protein of unknown function (DUF1666) 325 414 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06846 Seca-Chr12 160430020 160431769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06846 - - gmx:100776190 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06846 12 160430020 160431769 Seca12g06846 12 160430020 160431769 ECH
Seca12g06846 12 160430020 160431769 Seca12g06846 12 160430020 160431769 PCT