Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06833 ATGGCTCCCAACAAGTTGGCGAAATCAGGGTCTTTCCGTCACACCTTGGCGGAGAAGAAGGAGAGGCTTCTCTCCATGAAGGGCGGCGGAGGAGGGTATTCCCAGATAGGGATTGGCTTGCATGAGGAAGAAGAACAACCATGGATGGTGAGATTCTGGAAGAAGGTGAAACGCGTTGCTGAGAAAGCATGGGAGATGGGTCGCTCTGATCCAAGAAAGGTTATATTCGCTGCAAAAATGGGTCTTGCTCTCACTCTCATCTCCCTTTTGATTTTCCTCAAAGAACCCTTCAAGGATATGAGTCGCTACTCTGTCTGGGCTATTCTTACTGTCGTCGTCGTCTTTGAATTCAGTATAGGGGCAACTCTAAGCAAGGGGTTTAACAGAGGATTGGGGACCTTGTCAGCTGGAGGACTTGCTTTGGGAATGGCAGAGTTATCAGCATTGGCTGGAGAATGGGAAGAGCTTATAATTGTTATTAGCATCTTCCTTGTAGGATTTTGTGCCACCTATGCAAAACTCTACCCGACTTTGAAGCCTTATGAATATGGATTCCGTGTGTTCTTGATCACCTATTGCTTTGTTACTGTATCTGGGTACCACACAGGGGAATTTGTTGATACAGCTATAAATAGATTTTTGCTCATTGCACTTGGTGCTGCTGTGTCTTTGGGAGTAAATATCTGTATATATCCAATCTGGGCTGGTGAGGATCTGCATAATCTCGTCACAAAAAATTTCATGGGTGTTGCAACATCTTTGGAAGGTGTTGTTAATCACTACCTTAATTGTGTTGAATACAAGAAGGTGCCATCGAAAATTCTTACATACCAAGCTTCTGATGACCCAGTTTACAATGGCTACAGATCGGCTGTGGAATCTACAAGTAAAGAGGATTCATTGGTAGTACTATCAACTACAGTTTTCTGTCTGTTTCATGAATATGTATTTATCATCCTTATGACTCATTGTCACATACTAGTGATTGAAGATGGGTTTTGCTGTCTGGGAACCACCTCATGGTCATTACAAAATGTTTAA 1041 0.4304 MAPNKLAKSGSFRHTLAEKKERLLSMKGGGGGYSQIGIGLHEEEEQPWMVRFWKKVKRVAEKAWEMGRSDPRKVIFAAKMGLALTLISLLIFLKEPFKDMSRYSVWAILTVVVVFEFSIGATLSKGFNRGLGTLSAGGLALGMAELSALAGEWEELIIVISIFLVGFCATYAKLYPTLKPYEYGFRVFLITYCFVTVSGYHTGEFVDTAINRFLLIALGAAVSLGVNICIYPIWAGEDLHNLVTKNFMGVATSLEGVVNHYLNCVEYKKVPSKILTYQASDDPVYNGYRSAVESTSKEDSLVVLSTTVFCLFHEYVFIILMTHCHILVIEDGFCCLGTTSWSLQNV. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06833 346 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 49 304 - -
Seca12g06833 346 Pfam Aluminium activated malate transporter 64 303 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06833 Seca-Chr12 160275536 160279535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06833 7 302 Miscellaneous Gene Families AT3G18440 64.968 7.28e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06833 K25841 - lja:Lj4g3v3099200.1 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06833 12 160275536 160279535 Seca12g06833 12 160275536 160279535 ECH
Seca12g06833 12 160275536 160279535 Seca12g06833 12 160275536 160279535 PCT