Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06820 ATGATGAACGTTGGTGCTTGTTCGGTGTCATCGATTAAGTTACCAAGTTGGCGCTTCTCAAAGCGCCTAATCTCTCTGTCTTCTTCGTCTTGCATCATGTCTCTCTTGTCCTCTCCCAATTCTTCAGCTTCCATAGCCACGACCGCATCACCCGCCACAGAGCCCACGAAGCCCAAACGGAAGGAACCTTGGTTAATTGTTGGACTCGGCAATCCAGGCAACAAGTACGCTGCCACCCGCCACAATGTGGGATTTGAGATGGTTGATACTATAGCTGAAGCCGAAGGGATATCTATGAGCAGCGTTTCCTTCAAAGCGCTATTTGGAAAAGGCTATATAGGTGATGTACCAGTTATACTTGCAAAACCACAGACTTTTATGAATTCAAGTGGTGAATCTGTTGGGGCCATAGTTTCTTATTACAAGATTCCGTTGAAGCAAGTACTTGTGATCTTTGATGACTTGGATTTACCTTTTGCTAAACTACGGCTGCTACCAAAGGGCGGACATGGAGGTCACAACGGGTAA 528 0.4621 MMNVGACSVSSIKLPSWRFSKRLISLSSSSCIMSLLSSPNSSASIATTASPATEPTKPKRKEPWLIVGLGNPGNKYAATRHNVGFEMVDTIAEAEGISMSSVSFKALFGKGYIGDVPVILAKPQTFMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNG. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06820 175 Gene3D - 49 175 IPR036416 GO:0004045
Seca12g06820 175 PANTHER PEPTIDYL-TRNA HYDROLASE 60 175 IPR001328 GO:0004045
Seca12g06820 175 NCBIfam aminoacyl-tRNA hydrolase 64 175 IPR001328 GO:0004045
Seca12g06820 175 Pfam Peptidyl-tRNA hydrolase 65 175 IPR001328 GO:0004045
Seca12g06820 175 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 76 89 IPR018171 GO:0004045
Seca12g06820 175 SUPERFAMILY Peptidyl-tRNA hydrolase-like 63 175 IPR036416 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06820 Seca-Chr12 160145629 160147949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06820 K01056 - gmx:100526866 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06820 12 160145629 160147949 Seca12g06820 12 160145629 160147949 ECH