Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06807 ATGATTGAGAAAATCCATCAAGTAAAAACTGCTGAGTTGAAGCTTAGTAAACCTGGTATTGAGGATGAAATTAATGATGATCAACTTTACAAGCTTTGTGCAATTTCCCATAGTTTGGGAGGAGGTTCAATGTTGATGTATGTTATTACGCGAAGGATAGAAGAGAAGCCCCATAGACTTTCTAGATTGGTTTTGTTATCACCTGCTGGTTTTCATCATGACTCTAACCTAGTTTTTTCTGTGGTGGAGCATGTGTTATTTCTGGCTCCTTTTTTGTCTCGTGTTTTCCCAGCCTTCTATATACCGACCAGATTTTTTCGGATGCTTGTTAACAAGTTAGCTCGGGACCTGCAAAACCTACCAGCAGTTGGAGGATTGGTTCAAACTTTAATGGGTTATGTTGTTGGTGGGGACAGCTCAAATTGGGTTGGAGTTCTAGGATTACCACATTACAACATGAATGACATGCCAGGAATATCTTTCTATGTTGCTCTCCATCTTGCACAGATAAAGCGAACTAGAAGATTTAGAATGTTTGATTATGGGAGTGCACATGCTAATATGGAGGTGTATGGTTCACCTGAGCCTTTGGACTTGGGGGAACACTACAGGCTCATTGACATTCCTGTTGATCTAGTTGCTGGTCACAAAGACACAGTGATACGACCTTCAATGGTAAAGAGACACTATAAATTGATGAAGGAGGCTGGAGTGGATGTGTCATATAATGAGTTTGAATATGCTCATTTGGACTTCACCTTCTCCCACATTGAAGAGCTTTTATCATATATTATGTCACGTTTGCTGCTTGTGGAGCCAAATCCAAAACATCAAGTGAATCAAAGGACCATAAGATCGAGGAAGAAAAGATAG 873 0.4009 MIEKIHQVKTAELKLSKPGIEDEINDDQLYKLCAISHSLGGGSMLMYVITRRIEEKPHRLSRLVLLSPAGFHHDSNLVFSVVEHVLFLAPFLSRVFPAFYIPTRFFRMLVNKLARDLQNLPAVGGLVQTLMGYVVGGDSSNWVGVLGLPHYNMNDMPGISFYVALHLAQIKRTRRFRMFDYGSAHANMEVYGSPEPLDLGEHYRLIDIPVDLVAGHKDTVIRPSMVKRHYKLMKEAGVDVSYNEFEYAHLDFTFSHIEELLSYIMSRLLLVEPNPKHQVNQRTIRSRKKR. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06807 290 PANTHER LYSOSOMAL ACID LIPASE-RELATED 30 266 - -
Seca12g06807 290 Gene3D alpha/beta hydrolase 1 269 IPR029058 -
Seca12g06807 290 SUPERFAMILY alpha/beta-Hydrolases 31 261 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06807 Seca-Chr12 160016707 160019585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06807 1 279 Lipid Metabolism Gene Families AT1G18460 75.357 1.48e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06807 - - gmx:100779931 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06807 12 160016707 160019585 Seca12g06807 12 160016707 160019585 ECH
Seca12g06807 12 160016707 160019585 Seca12g06807 12 160016707 160019585 PCT