Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06635 ATGGGGGCCAACGTGACTGTGAATTGCGTTCATCCGGGGATCGTGAGAACCAGACTCACCAGAGAGCGTGAAGGATTACTTACAGATTTAGTCTTCTTTTTGGCTTCTAAGCTCTTAAAGACGATTCCTCAGGCAGCTGCAACAACATGTTATGTGGCAACAAATCCAAGGCTCTTGAATGTGTCTGGCAAGTACTTTGCTGACTGCAACGAAGCCTCTACCTCAAAATTGGGATCCAACTCAACTGAAGCAGCAAGGTTATGGGCCGCTTCCGAATTCATGATTTCAAGGGGTCCAAAAGTTGCCTTTGACCTCCTCAAGCACCTTGAATTTTGA 336 0.4643 MGANVTVNCVHPGIVRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATNPRLLNVSGKYFADCNEASTSKLGSNSTEAARLWAASEFMISRGPKVAFDLLKHLEF. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06635 111 PANTHER RETINOL DEHYDROGENASE 2 92 - -
Seca12g06635 111 Gene3D - 1 97 - -
Seca12g06635 111 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 73 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06635 Seca-Chr12 158352461 158353229 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06635 - - gmx:100794347 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06635 12 158352461 158353229 Seca12g06635 12 158352461 158353229 ECH