Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06610 ATGGGGTGTGCCTCTTCCAAGCGCATCGAGGCAACCGCAGCCGTTTATCACCCACCGCCTACCAGCTTCGCAGTATTTGATATCAACGCCATAGAGGAGCCATGGCTGAAGCACCTCAACAACAACACTACCCCACTCCCCCAAGATAAACCCGCTCTCCCTCCCCCTATTCTCCAAAAACTCAACATGCTCGACGCTACTGAAGCTCCTCAATCCTGGGACGAAATTAGCAAGACACTCCAAGACCTCAAACCCATAGTTCAAAAACTACCCTCACAACTACCCTCTACTAATTCACCACCACTGCAACAGCCATCACCGCAACCTCCACGCAAAACTGCATCCTTCCACACACTCGAAGAATTAGATGCCAAATTAACCCCTAAGCCCAAGCCTGAGCTAAATAAAAAACCTAACACCAACAAAAACATGAACAGGAGCGTCTCTCAACCAAGGGAAGAAGATGAAGGAGGAGTCAGAATCAAACCCTTGAAGGATAACATCTTCATAGTGAGAGACAGGTTGGAGAGACAAAAGGAAGAGAAGGAATCCATTTACGAAAAGATAAGAAGGGACCCGCTGAGTCAGTTCCCAGAGAAGTGCCCGCCGGGTGGGAACGACGCGGTCGTGATATATACGACGTCGTTGGGGGGAGTTAGGAAGACGTTTGAGGATTGTAACAGAGCAAGGGAGGTTTTGGAGAGACACCGGGTGGTGACGGACGAGCGTGACGTGTCGCTTCATGGTGAGTTCTTGAGGGAGGTGAAGGAGTTAGTGGGGGAAGGTGTAGCGCTGCCTAGGGTGTTCGTGAAGGGAAGGTATTTGGGTGGGTTGGACGAGTTGGTTGAGCTGAACGAGACGGGTCGACTCGGTAGGATATTGAACGTGACACGTGTGGAGAGAGGAGTTGGCAGGCAAGCGTGTGGAGGGTGTGGTGGGGCAAGGTTTGTTCCTTGTTTGGACTGTGGTGGCAGTTGCAAGTTGGCTGATAAAGAAAGGTGCCCCAAGTGCAATGAGAATGGGTTAGTGATATGCCCTGCTTGTGCTTAG 1050 0.5105 MGCASSKRIEATAAVYHPPPTSFAVFDINAIEEPWLKHLNNNTTPLPQDKPALPPPILQKLNMLDATEAPQSWDEISKTLQDLKPIVQKLPSQLPSTNSPPLQQPSPQPPRKTASFHTLEELDAKLTPKPKPELNKKPNTNKNMNRSVSQPREEDEGGVRIKPLKDNIFIVRDRLERQKEEKESIYEKIRRDPLSQFPEKCPPGGNDAVVIYTTSLGGVRKTFEDCNRAREVLERHRVVTDERDVSLHGEFLREVKELVGEGVALPRVFVKGRYLGGLDELVELNETGRLGRILNVTRVERGVGRQACGGCGGARFVPCLDCGGSCKLADKERCPKCNENGLVICPACA. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06610 349 MobiDBLite consensus disorder prediction 116 136 - -
Seca12g06610 349 Coils Coil 172 192 - -
Seca12g06610 349 CDD GRX_GRX_like 208 345 - -
Seca12g06610 349 ProSiteProfiles Glutaredoxin domain profile. 197 301 - -
Seca12g06610 349 MobiDBLite consensus disorder prediction 91 159 - -
Seca12g06610 349 SUPERFAMILY Thioredoxin-like 202 295 IPR036249 -
Seca12g06610 349 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 124 348 - -
Seca12g06610 349 Pfam Glutaredoxin 209 274 IPR002109 -
Seca12g06610 349 Gene3D Glutaredoxin 207 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06610 Seca-Chr12 158188456 158189505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06610 K17479 - gmx:100809536 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06610 12 158188456 158189505 Seca12g06610 12 158188456 158189505 ECH