Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06606 ATGGAGATATCTTCCTCTGTCTTGTCGGAACCATTCCTCGTTGCCGTTACTGTGACCGCGCTCTGTTTCTTTCTGGCGCTCTTTTCTCTCCTCCGACCATTCTCTTCTCTCAAGAAATTCAGGAAGCGTTGCGATTGTGCCTCTTCCCTTTCTAATTCCGATTCCGCTTCCGCCAGTGCCGTGCCCTACTTGAACGGCGGTGTCTCAGAAATGCTCGAGACCAGTCCCGCTCCGGCGCCGGCCCTGGCGCCGGTTCCACCTCCGGCTTCAGCTATGTTGGCTGAGCGACGCACGGGGTCATCGATGATGGAGGAATTGGTTCCAGAAATCACGACCCATGCTCTGAGTTACTTGGATTATCCGAGTTTGTGTCGCCTTTCAATGACCAATTCTTTGATGCGAAAGGCTGCCAATGATGATAATGCTTGGAAGGCCCTATATCACAAGGACTTCACATTGGAACAAGATAGTATTACACCAAGTAATGGGTGGAAGGCTTACTATGCTGCAACAAGAGCAATTGTGAATTTTAATACAGAATTCTTCAACATTATAAGAGATAAGTCCATTCCAGCAATGAGTCGTTTTTGGCTAAATGCAGATTACGTGAAGTGCATTCATGCCTCAGGAGAACTGTTTTCAGGGTATAATGCAGTAATGCAGAGTTGGCAACTCGTGTTCAACTGGGAGCAAGGATTGAACTTTCAGGTTCGGGATGTACGTGCTCGGGTTTTGACAGACATGGCTTGGGTTACCATGAAAACATATGTTGACATGGATACAGGGCCATTCAATATGACCAATGTCTTTGAGTTCCATAATGGAAGGTGGTATATGGTACATCATCACAGTTCTGTGATGAATGGGGAGGTGGAGCCACAGAATGTGCATGGATAA 897 0.4716 MEISSSVLSEPFLVAVTVTALCFFLALFSLLRPFSSLKKFRKRCDCASSLSNSDSASASAVPYLNGGVSEMLETSPAPAPALAPVPPPASAMLAERRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSITPSNGWKAYYAATRAIVNFNTEFFNIIRDKSIPAMSRFWLNADYVKCIHASGELFSGYNAVMQSWQLVFNWEQGLNFQVRDVRARVLTDMAWVTMKTYVDMDTGPFNMTNVFEFHNGRWYMVHHHSSVMNGEVEPQNVHG. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06606 298 ProSiteProfiles F-box domain profile. 100 146 IPR001810 GO:0005515
Seca12g06606 298 CDD F-box_FBXL4 104 149 - -
Seca12g06606 298 SUPERFAMILY NTF2-like 169 287 IPR032710 -
Seca12g06606 298 SUPERFAMILY F-box domain 98 173 IPR036047 GO:0005515
Seca12g06606 298 PANTHER F-BOX PROTEIN SKIP8 1 297 IPR044260 -
Seca12g06606 298 Pfam SnoaL-like domain 175 288 IPR037401 -
Seca12g06606 298 Gene3D - 165 295 - -
Seca12g06606 298 Gene3D - 90 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06606 Seca-Chr12 158166661 158169684 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06606 - - gmx:100807571 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06606 12 158166661 158169684 Seca12g06606 12 158166661 158169684 ECH