Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06601 ATGAGACCCGCAACCGTTCCACCACCACCGGCGGCCGTGCCCAACGGACACTTACCGGTAACAAGGCCACCAAAGAGGCCACGCCCACCCTCTGGACGCACCAATCTCGCTTCCTGTGTCGTCGCCACCATCTTCTTAATCTTCCTCATCATCGTCATCCTCATAGTCTACTACACAGTCTTCAAACCACAAGACCCTAAGATCGCCGTTAGCGCCGTTCAGCTTCCGTCATTCTCCGTCGCTAACGGCACCGTCAATTTCACTTTCTCCCAATATGCCTCCGTCAAAAACCCTAACCGCGCCGCTTTCTCCCACTACGACAGCTCCCTACAGCTCCTCTACTCCGGCAGCCAGGTCGGGTTCATGTTCATCCCCGCCGGCGAGATCGACGCCGGCCGGACACAGTACATGGCGGCGACGTTCTCCGTTCAGTCGTTCCCGTTGTCGGCGCCGGTGGGATTTGGTCCCACCCTAGCGAATGGGGATGGGGTTGGGTTTAACAATGGGTTGAGGGTGGAACCAACGATGGAGATCGAGTCCAAGTTGGAGATGGCGGGGCGCGTGAGGGTTTTGCACTTCTTCACTCACCACGTGCAAGCCAGAGCCGGTTGCAGGGTTGCCATTGCTGTCAGTGATGGATCTGTTTTAGGTTGGAATTGGAAATGGAATCAAACAAGTCATCAAAGTGAGAAGAAGAGGGCCACCCCTTGCTTCCTTGCGTGCTTTGGGGTGGGTTTTGGGGTTATGGACAGGCTATGTTAA 762 0.5591 MRPATVPPPPAAVPNGHLPVTRPPKRPRPPSGRTNLASCVVATIFLIFLIIVILIVYYTVFKPQDPKIAVSAVQLPSFSVANGTVNFTFSQYASVKNPNRAAFSHYDSSLQLLYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSAPVGFGPTLANGDGVGFNNGLRVEPTMEIESKLEMAGRVRVLHFFTHHVQARAGCRVAIAVSDGSVLGWNWKWNQTSHQSEKKRATPCFLACFGVGFGVMDRLC. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06601 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 28 211 - -
Seca12g06601 253 SUPERFAMILY LEA14-like 47 145 - -
Seca12g06601 253 Pfam Late embryogenesis abundant protein 94 200 IPR004864 -
Seca12g06601 253 MobiDBLite consensus disorder prediction 1 30 - -
Seca12g06601 253 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06601 Seca-Chr12 158102935 158104777 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06601 - - gmx:100782341 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06601 12 158102935 158104777 Seca12g06601 12 158102935 158104777 ECH
Seca12g06601 12 158102935 158104777 Seca12g06601 12 158102935 158104777 PCT