Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06600 ATGGCATCTGAGAGGGAAAGTTTTGACCTCTCAGGACCTCTACATCTAACTTACGTCTTATGGGATAATGCATATCACCGAATGTCAGTTGCTGCTAGTTTGGTCCAAGGTGTTTATATTTTAGAAAGGGACCGGCAAGAGAAACGTGAAGGTCCGAATGCTCTTGCACCACCTTGGTGGACATTCTTCCACTTTCAGCTGCTTCGTCCACTTATAGATGATGTTGATTCTTCCATCTTTGGTGCAATCTATGAGTTCAAACCTCCGTCATCTCAGTTTAATGACACTTTATACAGAAGTCCACGTTACGTGGTTGCCTTTCGAGGGACTCTAACCAAATCAGACTCAGTTTCACGTGATATTGAGTTGGATATCCACTTTATCCGACAAGGGCTTCATCAAACTTCTCGCTCTGAAATTGCTATTCAAGCTGTTCGAAATGTGGTAGCAACTGTAGGTGATTCAAATGTCTGGTTGGCTGGACACTCTCTTGGATCAGCAATGGCAATGCTTACTGGGAAAACCATGGCCAAGAATGGCATGTTTATTGAATCTTTTCTTTTCAATCCACCATTTGTATCTGCTCCAATTGAGAGAATTAAGGATGAGAGAGTGAAGCATGGTCTTCGAATTGCTGGCAGTGTAATAACAGCTGGACTCACCATTGCTATGAAAGCCAAGCAGCAGAAGGATTCATCTATTGATCCATTTGCTGCTTTGTCTGCCTGGGTCCCATGTTTATTTGTGAATCCATCTGACCATATCTGCTCAGAGTATATTGGATACTTTGAACACAGAAGGAAAATGGAGGAGATTGGAGCAGGAGTCATTGAAAGGTTAGCAACTCAAAACTCACTTGGTGGCCTGCTGATGAGTGCGTTTGGGAAGGAATCTGAACCCCTGCACCTCATTCCTTCAGCTTCTCTCACAGTTAATGTTACTCCTACAAATGATTTCAAAGAAGCCCATGGGATACACCAGTGGTGGAAACCTGACTTGCGCCTGGAAAACAAGCTCTACAATTACAAGTAG 1032 0.4331 MASERESFDLSGPLHLTYVLWDNAYHRMSVAASLVQGVYILERDRQEKREGPNALAPPWWTFFHFQLLRPLIDDVDSSIFGAIYEFKPPSSQFNDTLYRSPRYVVAFRGTLTKSDSVSRDIELDIHFIRQGLHQTSRSEIAIQAVRNVVATVGDSNVWLAGHSLGSAMAMLTGKTMAKNGMFIESFLFNPPFVSAPIERIKDERVKHGLRIAGSVITAGLTIAMKAKQQKDSSIDPFAALSAWVPCLFVNPSDHICSEYIGYFEHRRKMEEIGAGVIERLATQNSLGGLLMSAFGKESEPLHLIPSASLTVNVTPTNDFKEAHGIHQWWKPDLRLENKLYNYK. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06600 343 Gene3D alpha/beta hydrolase 79 206 IPR029058 -
Seca12g06600 343 SUPERFAMILY alpha/beta-Hydrolases 18 197 IPR029058 -
Seca12g06600 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 341 - -
Seca12g06600 343 Pfam Lipase (class 3) 138 182 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06600 Seca-Chr12 158096396 158099681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06600 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 59.298 3.40e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06600 - - gmx:100812620 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06600 12 158096396 158099681 Seca12g06600 12 158096396 158099681 ECH
Seca12g06600 12 158096396 158099681 Seca12g06600 12 158096396 158099681 PCT