Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06579 ATGGGTTCTAGAGTTGGATGCATGGTGGCTAGCATGGAGGATATTAATGTTTCTGCTGTAGTATGCTTGGGCTACCCATTAAAGTTGCCAATGTTCCAGGGAATCAATGGTGCGGTTAGAGATGACACACTGTTACAGCTAACGGTTCCTACAATGTTTGTACAGGGCAGCAAGGATGGTCTCTGTCCACTTGAGAAGTTAGAAGCCACAAGGAAGAAGATGAAAGCGCCCAACGAGCTGCATGTCATTGATGGTGGTGATCACTCTTTTAAGATCGCTAAGAAGCATCTGCAAGGAAACGGTTCCACCCAACATGAAGCTGAAGATGTTGCTGTGCAGGCCATTGCCGCTTTCATTTCCAGGTCTCTTGAAGGATGA 378 0.4656 MGSRVGCMVASMEDINVSAVVCLGYPLKLPMFQGINGAVRDDTLLQLTVPTMFVQGSKDGLCPLEKLEATRKKMKAPNELHVIDGGDHSFKIAKKHLQGNGSTQHEAEDVAVQAIAAFISRSLEG. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06579 125 Pfam Alpha/beta hydrolase domain 1 119 IPR046879 -
Seca12g06579 125 Coils Coil 120 125 - -
Seca12g06579 125 PANTHER TESTIS DEVELOPMENT PROTEIN PRTD 1 123 IPR026555 -
Seca12g06579 125 SUPERFAMILY alpha/beta-Hydrolases 1 123 IPR029058 -
Seca12g06579 125 Gene3D alpha/beta hydrolase 1 100 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06579 Seca-Chr12 157898303 157901230 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06579 K07020 - gmx:100527322 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06579 12 157898303 157901230 Seca12g06579 12 157898303 157901230 ECH