Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06575 ATGGCAGCTGCTACGAACTTGCCCCTTCTGTCCCTCTGTAAATCCCCCAAGTTCGTTAACCCTTCAACTTCAACTTCAACTTCAACAAGCTTCTTGCAACCTGATTATGCTTATGCAGGCAACATCAGAAGAAGCAGGGAATTGAAGAGTTACAGAAAGAGAGCATTGATTGTGTGTGTGCTCCCATTGAACGTTGATCCATGGGCACCCACCATTGATTCCCAGAGCATCGCTTCCCAGCTATTTGCATTTTCATTGTTTCCCTACATCGGCTTCTTGTACTTCATCACCAAGTCCAAGACTGCCCCTAACCTCACCCTCTTTGGCTTCTACTTTCTCCTCGCCTTTGTTGGAGCCACAATACCAGCTGGAATTTACGGTGAGTCACGTTCACTTGCTGAAAATGAAGTTCAATTAGATAGGCATGTGTATGGGTATCTGATTTCTGTTTAG 453 0.4525 MAAATNLPLLSLCKSPKFVNPSTSTSTSTSFLQPDYAYAGNIRRSRELKSYRKRALIVCVLPLNVDPWAPTIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPNLTLFGFYFLLAFVGATIPAGIYGESRSLAENEVQLDRHVYGYLISV. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06575 150 Pfam Protein of unknown function (DUF3593) 79 129 IPR021995 -
Seca12g06575 150 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 14 129 IPR021995 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06575 Seca-Chr12 157882345 157883502 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06575 - - gmx:100816295 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06575 12 157882345 157883502 Seca12g06575 12 157882345 157883502 ECH