Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06573 ATGGCAGAACCACCCAAGGGGGAGAACCGCCGTGATGAGGACGACGCTGGAGCTGCTTTTGTCCTCCAATCCAAAGGTGAATGGTGGCACGCGGGTTTTCACTTGACTACGGCGATTGTTGGGCCAACTATACTGACGCTACCATACGCGTTCAGAGGATTGGGGTGGGTGCTTGGCTTCTTGAGTCTCACCATAATGGCTGCTGTCACCTTCTACTCTTACTTTCTTATGTCCAAAGTGCTTGATCACTGTGAAAAATCCGGTCGCCGCCATATCCGTTTCCGGGAACTTGCCGCCGACGTATTAGGTGATTACTATGTAACCATGATTGTAAAAGTTGTGACCTTGCCTTGTTGCTTGACAGGATCGGGATGGATGTTCTATTTTGTAATCTTTATTCAAACGGCAATCAACACTGGCGTTGGCGTAGGTGCAATCTTGCTTGCTGGCGAATGTCTTGAGATCATGTACTCCAGTATTTCACCTCACGGATCCTTGAAATTGTACGAGTTTATAGCAATGGTGACAGTGGTAATGATAGTTTTATCTCAGCTTCCCACTTTCCATTCCCTGCGACACATCAACTTATGTTCTCTGCTTCTCAGCCTGGGCTACACCCTTCTGGTGGTTGGTGCCTGTATTCATGCAGGCACGTCAAAAAACGCCCCCCCAAGGGACTATTCCTTAGAACCTAAGAAATCTGCAAGGGCCTTCAGCGCCTTCACTTCCATCTCCATACTTGCAGCAATATTTGGGAATGGCATATTACCCGAGATACAAGCAACTCTAGCACCCCCTGCCACTGGGAAGATGGTAAAAGGTCTTATTATGTGTTATATTGTAATTTTCTTGACTTTCTACTCTGCTGCTGTTTCTGGATATTGGGTATTTGGAAGCAAGTCCAACTCAAACATTTTAAAGAGTCTCTTGCCAGATGATGGACCTTCTTTGGCCCCAACTTGGGTCCTTGGGCTTGCAGTCATCTTTGTCCTTCTTCAGCTCTTTGCAATTGGCCTGGTTTATTCTCAAGTTGCTTATGAAATAATGGAGAAGAAATCAGCTGATGTGAAGCAGGGGATGTTTTCCAAAAGAAATCTTATTCCTCGCCTAATTCTTAGGACAATTTACATGATATTCTGTGGGTTTATGGCAGCCATGTTGCCATTTTTTGGAGACATTAATGGTGTTGTTGGTGCTATTGGTTTCATCCCTCTGGATTTCGTTCTGCCTATGCTTCTATACAACATGACATACAAGCCTAAAAAATCATCCTTGACTTATTGGGTCAACATGTCAATTATGGTGGTATTCACTGGTGCAGGAATCATGGGTGCATTTTCTTCTGTAAGGAAATTGGTTCTTGATGCCAACAAATTTAAGCTATTTGGCAGTGATATTGTGGATTGA 1407 0.4442 MAEPPKGENRRDEDDAGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWVLGFLSLTIMAAVTFYSYFLMSKVLDHCEKSGRRHIRFRELAADVLGDYYVTMIVKVVTLPCCLTGSGWMFYFVIFIQTAINTGVGVGAILLAGECLEIMYSSISPHGSLKLYEFIAMVTVVMIVLSQLPTFHSLRHINLCSLLLSLGYTLLVVGACIHAGTSKNAPPRDYSLEPKKSARAFSAFTSISILAAIFGNGILPEIQATLAPPATGKMVKGLIMCYIVIFLTFYSAAVSGYWVFGSKSNSNILKSLLPDDGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGMFSKRNLIPRLILRTIYMIFCGFMAAMLPFFGDINGVVGAIGFIPLDFVLPMLLYNMTYKPKKSSLTYWVNMSIMVVFTGAGIMGAFSSVRKLVLDANKFKLFGSDIVD. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06573 468 PANTHER OS05G0424000 PROTEIN-RELATED 27 436 - -
Seca12g06573 468 Pfam Transmembrane amino acid transporter protein 25 451 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06573 Seca-Chr12 157855676 157865959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06573 1 468 Organic Solute Cotransporters AT5G41800 77.707 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06573 - - gmx:100815232 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06573 12 157855676 157865959 Seca12g06573 12 157855676 157865959 ECH