Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06557 ATGGCCATTGCGGCGCACAACGAGGATGCAAATGTTGCCCTTGTTGGCCACACCTACTTAATCAAAGGAATCTTGCCAGATGGAGTGTTCTTCATAGCTTATACATATGCCGGGGAGCTTCCAAGCGGCGCATTTGGGTTCAATAGCCATGGACTGGCATTCACCCTGAATGCAGTACCCCCGGCTGAAGATGAGATTGTGGCTGGTGGCATTGGGCGCAACTTCATCTCTCGAGACATTCTTGAAGCTAAGAACATAGATGATGCTATCAATAGGATCAATTCATCAGAAGTTTCTGTTGGGCATTCTTATAACCTGATTGAAACAAGTACGCGCAGGATTTTCAATGTTGAAACTGCTTCAAGGAAGCGGATTTCAGTTCATGAGGTGGGGAAAACGCCTTTCTTCCATGCAAACATGTATCTTCACCTACATGTTAATCAGGTAGAAGATGAGAATTCAATGAGCAGGCAGAAAAGGGCAAGTGTATTGAAAAAAATATCAAAAGAGGATTTCCTGTCACTTCTAGGAGATATGGATGACAAAAAATACCCCATCTACATGACAGGTCCATTACTTCACACACTCTGTACTGCTATTATAGATCTGGACGAACAAACACTATCAATTATTGCAGGGAATCCAAAAAAGGGAGATGTTTCACATGTTTTCTCTATCCCCAAAAGTCTCCATGGTCATCAAATGTAG 708 0.428 MAIAAHNEDANVALVGHTYLIKGILPDGVFFIAYTYAGELPSGAFGFNSHGLAFTLNAVPPAEDEIVAGGIGRNFISRDILEAKNIDDAINRINSSEVSVGHSYNLIETSTRRIFNVETASRKRISVHEVGKTPFFHANMYLHLHVNQVEDENSMSRQKRASVLKKISKEDFLSLLGDMDDKKYPIYMTGPLLHTLCTAIIDLDEQTLSIIAGNPKKGDVSHVFSIPKSLHGHQM. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06557 235 Pfam Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 3 216 IPR005079 -
Seca12g06557 235 NCBIfam C45 family autoproteolytic acyltransferase/hydolase 3 208 IPR047794 -
Seca12g06557 235 Gene3D Penicillin V Acylase; Chain A 1 226 - -
Seca12g06557 235 PANTHER PEPTIDASE C45 1 227 IPR047801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06557 Seca-Chr12 157678533 157687591 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06557 - - gmx:100820390 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06557 12 157678533 157687591 Seca12g06557 12 157678533 157687591 ECH