Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06556 ATGAGAAACCAATGTTATAGTTATACCTTTCTCATTTTTTCCTTACTCCTATCCTCCTTCCACACTAATGTTTCTTCTTCCAAGACACCAAAGAAACCTTGTAAGAGTATTGTGGTATATTACCACGACATCCTATTCAATGGCACAAATGCTGCCAACGCAACATCTGCTAAGGCAACTAATGGGAGTAAACTTGGTAGCTCTGAAATGGGGCTGCTTGTTATTTTTGATGACCCCGTGACAAAGGACCAAAACCTTGTATCTCCACCTGTTGCAAAAGCTCAAGGTTTCTATTTCTACGACAAGAAAGATTCTTACAATGCTTGGTTTGCCTACACTTTGGTCTTCAATTCAAGCGAGCACAAAGGTACCCTAAACATAATGGGTGCTGACTTAATGAGAGAGAGGACGAGGGATCTTTCGGTTGTTGGTGGGACTGGTGACTTCTTCATGACTAGGGGCATTGCCACATTACAGACCGATGAAGTGGAGGGTGTCAAATACTTTCGCCTCAAGATGGACATTAAATTGTATGAGTGTTACTAA 546 0.4158 MRNQCYSYTFLIFSLLLSSFHTNVSSSKTPKKPCKSIVVYYHDILFNGTNAANATSAKATNGSKLGSSEMGLLVIFDDPVTKDQNLVSPPVAKAQGFYFYDKKDSYNAWFAYTLVFNSSEHKGTLNIMGADLMRERTRDLSVVGGTGDFFMTRGIATLQTDEVEGVKYFRLKMDIKLYECY. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06556 181 PANTHER DIRIGENT PROTEIN 4 181 IPR004265 -
Seca12g06556 181 Pfam Dirigent-like protein 35 177 IPR004265 -
Seca12g06556 181 Gene3D - 19 177 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06556 Seca-Chr12 157675771 157676316 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06556 - - ghi:121211153 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06556 12 157675771 157676316 Seca12g06556 12 157675771 157676316 ECH