Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06555 ATGGGTGCCAAAGTTGCTCTGTTTGTTTTTTTAATGTTATTTGGTTTATGTTCAGCCAAGAGGAAGCAATATGAACCATGCAAACACTTGGGCCTCTATTTTCATGATATTCTTTACAATGGAAAGAATGCAGGTAATGCAACGTCCGCAATAGTAGCAGCTCCAGAAGGTGCTAATTTGACCAAATTGGCAGGTCAATCTCACTTTGGGAACATAGCAGTTTTCGACGACCCCATCACATTGGATAATAACCTTCACTCCAAACCCGTTGGGAGGGCACAGGGGTTTTATATTTATGATACTAAGAACACTTTCACTGCTTGGTTGGGTTTTACATTTGTTCTTAATAGCACACAACATCAGGGAACCATCACTTTTGCTGGAGCTGACCCCATTCTCAAGAAAACCAGAGATATCTCTGTCACTGGTGGCACTGGAGACTTCTTTATGCACAGAGGAATTGCCACCGTTATGACTGATGCATTTGAAGGCGAGGTTTATTTCCGGCTTCGTGTTGATATTAACTTCTATGACTGTTGGTGA 543 0.418 MGAKVALFVFLMLFGLCSAKRKQYEPCKHLGLYFHDILYNGKNAGNATSAIVAAPEGANLTKLAGQSHFGNIAVFDDPITLDNNLHSKPVGRAQGFYIYDTKNTFTAWLGFTFVLNSTQHQGTITFAGADPILKKTRDISVTGGTGDFFMHRGIATVMTDAFEGEVYFRLRVDINFYDCW. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06555 180 Gene3D - 15 174 IPR044859 -
Seca12g06555 180 Pfam Dirigent-like protein 27 172 IPR004265 -
Seca12g06555 180 PANTHER DIRIGENT PROTEIN 16 180 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06555 Seca-Chr12 157659781 157660323 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06555 - - qsu:111994098 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06555 12 157659781 157660323 Seca12g06555 12 157659781 157660323 ECH