Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06544 ATGGCTCAGAGTCCGAGTGAGTTCAAGCCCTTAGCTCCTTTCATATCATCATGCACTCACTTCAGCAACCAAGAAGATCAACCCCACATATCTGAAAGGCAAACCATTCGCATGAGAAAGTTCATTCGATGCTGTGGATGTGTCACTGCCATTATTGTGATATTTGTAGTCATACTTATAGTTCTGGCTTTTACTGTCTACAATGTCAAAGAGCCAGAGGTGAAGATGAATGGGGTTACCCTTCTCAATGGAAATCTCACTACTGATAATAACATTACACTTCTTGCTGATGTCTCTGTCAAGAATCCAAACGCCTTCACCTTCAGGTTTGGAAACACCACCACCACTGTTTACTATGATGGCAAGGGAATAGGACAGGGCACAACACCACCAGGTAAAGCCAAAGCCAGAAGGACTATGAGGTTCAACGTGACGATGGAGATCATGGCAAAGGAGCTTTTGAATAGCCCAAACTGGGTCAACGATCTCAGAGATCAAGCTTTTAATATCAGCAGCTATACCAGGATTGATGGCAAGGTGAAAATACTTAATTTGATTAAGAGGAAGGTTGTGGTTGATTTGAATTGCACTAATCAATACAACTACACCACTGGTTTAATCACACATGGTGAAAATTGCGTCGGATTTGTTGATATTTAG 660 0.4182 MAQSPSEFKPLAPFISSCTHFSNQEDQPHISERQTIRMRKFIRCCGCVTAIIVIFVVILIVLAFTVYNVKEPEVKMNGVTLLNGNLTTDNNITLLADVSVKNPNAFTFRFGNTTTTVYYDGKGIGQGTTPPGKAKARRTMRFNVTMEIMAKELLNSPNWVNDLRDQAFNISSYTRIDGKVKILNLIKRKVVVDLNCTNQYNYTTGLITHGENCVGFVDI. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06544 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 35 198 - -
Seca12g06544 219 Gene3D - 58 202 - -
Seca12g06544 219 Pfam Late embryogenesis abundant protein 98 197 IPR004864 -
Seca12g06544 219 SUPERFAMILY LEA14-like 53 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06544 Seca-Chr12 157552048 157552707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06544 - - gmx:100527705 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06544 12 157552048 157552707 Seca12g06544 12 157552048 157552707 ECH