Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06539 ATGAGGGTGTTTTCAAGGTTCAAGTTTCTGTCAAGAGCAGTGCACGAGGAACACGGTCATGATGAAATTGGGGAGAAAAACAAGTACCCTGTAATAACTGAAGGAAGTTTGTGCACATCCCTAACGGTTTGGAGAAAATCCCTTGTAATTAGTTGTAAAGGATTCACGGTGATCGATTCATATGGAAACCTTGTGTATCGCGTTGACAATTACATCGTGCACCCTCACGAAGTCATTCTTATGGACGCTTCAGGAAACTCTGTCCTCACCATGCGCCGCCGCAGGCAGAAGCTTGGATTGGTAGATAGCTGGTTTGTGTATGAAGGGGAAACGGGGAACCAGTGTGCGAGGAGGAGTAAGTCAAGAGAGAGTCCAGTTTGTTGTGTAAGGAAGCGTGTCAATATATTAAACGGCAATCCCAAGGTTCAGGCATACGTGTACCGCGTTGCGTCGGATTCAGGTAAACGACATGCGGCGTTTACAGTAGAAGGTTCCTATGCAGATAGGACATGTAAGGTGTTGGATGAGTGTAAAAGTGCCGTTGCTGAAATCAAGAGAAAGGAGGCTAATAGCAAAGATGCCTCTTTCGGGATAGAGATTTTTCAGTTAGTTGTTCAACCCGGGTTTGATCCTGCCTTTGCCATGGCACTCGTTTTGCTACTGGATCAAATGTTTACATAA 681 0.4537 MRVFSRFKFLSRAVHEEHGHDEIGEKNKYPVITEGSLCTSLTVWRKSLVISCKGFTVIDSYGNLVYRVDNYIVHPHEVILMDASGNSVLTMRRRRQKLGLVDSWFVYEGETGNQCARRSKSRESPVCCVRKRVNILNGNPKVQAYVYRVASDSGKRHAAFTVEGSYADRTCKVLDECKSAVAEIKRKEANSKDASFGIEIFQLVVQPGFDPAFAMALVLLLDQMFT. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06539 226 SUPERFAMILY Tubby C-terminal domain-like 37 225 IPR025659 -
Seca12g06539 226 PANTHER - 38 225 IPR007612 -
Seca12g06539 226 Pfam LURP-one-related 38 219 IPR007612 -
Seca12g06539 226 Gene3D - 36 226 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06539 Seca-Chr12 157459191 157460422 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06539 - - gmx:100796827 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06539 12 157459191 157460422 Seca12g06539 12 157459191 157460422 ECH
Seca12g06539 12 157459191 157460422 Seca12g06539 12 157459191 157460422 PCT