Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06534 ATGGCGGCGCCTGAATCCCCTCTTTGTTACGTCGGTGTCGCCAGGCAATCCGCCGCTTTTCGCCTCATGAAGCAAATGGGTTGGGAAGAAGGAGAAGGTCTTGGGAAAGAGAAGCAGGGGATCAAAGGACATGTTCGTGTCAAAAACAAGCAGGACACTGTTGGTATTGGCTTAGAGAAGCCTAACCACTGGGCATTTGACACCACGCAATTTGATAATATCCTCAAGAGATTGAAAGTTTGTGAATGTATTATGAGGGTTGTGTTTTTATCTACTGTGACAGACATAGAGAAAAATAGCCCAGATAAGGTGGAAACGGAGGCTAGTGTTCCTGTTGAACATAAGGAGTCTATCTCCAAGTGTACTAGACCACAAGGAAGATACAAGAGAAGAGAGAGAGGGAAGCTTGTCTCCGAATATTCCTCAAAGGATCTTGAAGGAATTCTTGTTAAAAAGGGTGACATATCTGGGGGTACTGACAGTTTCGATGATGAACTTGATTTGTTGAAGACATCTGAAACTCAAAATTTTGAAGATGAAGAAAGCAAATATCCTATTATCCATCCAGAGTGGTGGGGCTATAAGTATGGTTTTGTCTCTGGAGGATATCTTGGAGCAGAATCAAAGAAGAGGAAGTCCTTGATGTCTGAAAGTGCTAAAAATGGACTGGAGAGAACTGCATTTTATGAAGAAGATCAAGAAAACCTCTACAAACTAGTCCAAGATAAATCAACAACAGGGAAGCAAGGACTAGGCATCAAGGACAGGCCCAAGAAAGTAGCTGGATGCTATTTTCAGGGTAAAAAGACATCATTTGATCATAGTGATAATGAAGATTCTGCTGACATTGATTCTCAGGAAAAACAAATACATGATGACTTCATTAAAGTAGAAAAGATTGTTGAATCCAAAATTAAGCTGAAAAAGTTGTGTAAACAGATTTTACAACAGGTGCCTGAAGGATCATTGAAACTGAAACAGCTCAAAGTTCTCATTGAAGAACATTCATCTTCAGTCTTGTCTGACTTTTCTTCAAAAAGAGAGGCTATTGCTTACTTGAAGCAAAAGCTGACAGGTAGTCGGAAATTTTGTATTGAAGGGAAAAAAGTGCGATTAGCATCTAAGAGAAGTTGA 1134 0.4004 MAAPESPLCYVGVARQSAAFRLMKQMGWEEGEGLGKEKQGIKGHVRVKNKQDTVGIGLEKPNHWAFDTTQFDNILKRLKVCECIMRVVFLSTVTDIEKNSPDKVETEASVPVEHKESISKCTRPQGRYKRRERGKLVSEYSSKDLEGILVKKGDISGGTDSFDDELDLLKTSETQNFEDEESKYPIIHPEWWGYKYGFVSGGYLGAESKKRKSLMSESAKNGLERTAFYEEDQENLYKLVQDKSTTGKQGLGIKDRPKKVAGCYFQGKKTSFDHSDNEDSADIDSQEKQIHDDFIKVEKIVESKIKLKKLCKQILQQVPEGSLKLKQLKVLIEEHSSSVLSDFSSKREAIAYLKQKLTGSRKFCIEGKKVRLASKRS. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06534 377 SMART G-patch_5 13 59 IPR000467 GO:0003676
Seca12g06534 377 Pfam G-patch domain 17 58 IPR000467 GO:0003676
Seca12g06534 377 MobiDBLite consensus disorder prediction 105 125 - -
Seca12g06534 377 ProSiteProfiles G-patch domain profile. 15 61 IPR000467 GO:0003676
Seca12g06534 377 PANTHER G PATCH DOMAIN CONTAINING PROTEIN 7 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06534 Seca-Chr12 157403340 157407710 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06534 K11135 - gmx:100784654 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06534 12 157403340 157407710 Seca12g06534 12 157403340 157407710 ECH