Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06532 ATGAAGGTGAGATTTCCTGCACAGAAAGTCGTGGTTAAGTTGGATTTGCACGATGACAAAGCAAAGCAGAAAGCTATGAAATCAGTTTCTAGCCTTGCAGGCATTGATTCCATCGCCATGGACATGAAGGAGAAGAAGCTGACTGTAGTGGGTGACATAGACCCTGTCCATGTGGTGAGCAAATTGAGAAAAACTTGGCACACAGAAATTCTAACTGTTGGGCCGGCAAAAGAGCCAGAGAAAAAGAAAGATGAAGGGAAGAAAGACGAAGGGAAAAAAGAAGATAACAAGAAGAAAGATGATGATAAGAAAAAAGATGAGAATGAACAAATTGCTGAGCTTGTCAAGCTCTACAAAGGATACAATCCCCACATGACTACATACTATTATGTTCAGAGTGCAGAAGAGAACCCAAATGCGTGTGCTATTTGTTGA 435 0.4115 MKVRFPAQKVVVKLDLHDDKAKQKAMKSVSSLAGIDSIAMDMKEKKLTVVGDIDPVHVVSKLRKTWHTEILTVGPAKEPEKKKDEGKKDEGKKEDNKKKDDDKKKDENEQIAELVKLYKGYNPHMTTYYYVQSAEENPNACAIC. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06532 144 Gene3D - 6 78 - -
Seca12g06532 144 MobiDBLite consensus disorder prediction 74 108 - -
Seca12g06532 144 ProSiteProfiles Heavy-metal-associated domain profile. 7 74 IPR006121 GO:0046872
Seca12g06532 144 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 8 141 - -
Seca12g06532 144 SUPERFAMILY HMA, heavy metal-associated domain 7 65 IPR036163 GO:0046872
Seca12g06532 144 Pfam Heavy-metal-associated domain 12 66 IPR006121 GO:0046872
Seca12g06532 144 MobiDBLite consensus disorder prediction 72 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06532 Seca-Chr12 157371310 157373231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06532 - - gmx:100527826 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06532 12 157371310 157373231 Seca12g06532 12 157371310 157373231 ECH