Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06530 ATGCCTGCAACTACAGAGAATAATCAAGGCTCGTTCCTGGGCCGAATAAGCATTCGAAGAAACCAAGTTATGTCCATGGACGGTAGCCACGATCAAGAGCTAGAAGACCTCGAGCTTTTCCAAAGACACGTCGGCGATCGATTCTCCGATCTATTATCCTCCACAACAGAGGACCCTTCCAGCGACGCTCTTCTCTCCATCGCTTGGCTCCGAAAGCTCCTCGACGAGCTCCTCTGCTGTGAAGCCGAATTCAAAGCCGTTCTCATGATGGGTCGCGACCCTTCCCAGATCTCCAAACCACCCCTCGACAGGCTCCTCCCTGAATTCCTCGACCGCGTCGTCAAATCCCTCGACGTTTGCAATGCCGTCGCACTCGGCCTCGACGCCGTCAAGAATCTCCAGAGGCTCGCCGAAATCGCCGTCGCCGCCCTCGAACCGCGACCAATCGGCGACGGCCAAGTCCGGCGCGCGAAGAAAGCCTTGAATTCCCTCGTGACGGCGATGTTGCACGAGGACGGTAACAACACCAAAGGAACAGAGAGGAGCAGGTCGTTCGGGAGAAGAGGCGGTGGGAACAACACCAATAAGGAGCGTAGCGCTGCGAGTTTCCGATCGATGTCGTGGACGATGGCGAGGAACTGGTCCGCGGCGAAACAAATTCATGCCATGTCATCAAATTTGCAAGCGCCACGTGGCGGTGAAGCCTCTGGGTTGGCTTCGCCTGTGTATATAATGGGTACTATTTTGGTGTTTGTTATGTGGACACTGGTTGCGGCGATTCCGTGTCAAGAGAGGAATGGATTGGGCACTCACTTTTCGCTCCAGAGGCAATTGGGTTGGGCCCAGCCCATGATTGGGTTACAAGAGAAGATTGCGGAGGAGTGGAAGAAGAAGGAAAAGAAAGGCTCAGTTGGGTTGCTGGAAGAGATGCAGAAGATGGAGAAGCTGGGCCAGTCTCTAATTGAATTTGCTGACTCGTTTCAGTTCCCAGCTGAAACGGAGCGTTTGGATGAGGTGAAGGGACAGGTGGAGGAATTGGGGGAAATTTGCAGGAAAATGGAGGAAGGGTTGGAACCTTTGCAGCAGCAGATTAGAGAGGTGTTTCACAGGCTTGTCAGGAGCAGGACTGAGTTTCTTCTTGTGTTGGAACAAGGGGGGAAATTGTCAACACCCGCTCTGTAA 1182 0.5364 MPATTENNQGSFLGRISIRRNQVMSMDGSHDQELEDLELFQRHVGDRFSDLLSSTTEDPSSDALLSIAWLRKLLDELLCCEAEFKAVLMMGRDPSQISKPPLDRLLPEFLDRVVKSLDVCNAVALGLDAVKNLQRLAEIAVAALEPRPIGDGQVRRAKKALNSLVTAMLHEDGNNTKGTERSRSFGRRGGGNNTNKERSAASFRSMSWTMARNWSAAKQIHAMSSNLQAPRGGEASGLASPVYIMGTILVFVMWTLVAAIPCQERNGLGTHFSLQRQLGWAQPMIGLQEKIAEEWKKKEKKGSVGLLEEMQKMEKLGQSLIEFADSFQFPAETERLDEVKGQVEELGEICRKMEEGLEPLQQQIREVFHRLVRSRTEFLLVLEQGGKLSTPAL. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06530 393 Pfam Protein ROH1-like 6 381 IPR008511 -
Seca12g06530 393 MobiDBLite consensus disorder prediction 186 202 - -
Seca12g06530 393 PANTHER BPS1-LIKE PROTEIN 16 382 - -
Seca12g06530 393 MobiDBLite consensus disorder prediction 171 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06530 Seca-Chr12 157357476 157358657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06530 - - psat:127107055 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06530 12 157357476 157358657 Seca12g06530 12 157357476 157358657 ECH