Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06521 ATGAAAGTGGGAGAGAAAGAGTCTGAAAAGCTAATTTGGGAGCAAATGAGAAGCCCTAAATCTGGCACTCCCATTGCAGGAGGTGTAGCTGTAGCACAGTCTCGAACCTTGCACAGGCTTCTCTTCTTGCTCATCCTCTTCGTTACCGTCACCTACGTCGTTTACACGCTCAAACTCATCTCCACATCACGCGCTTGCCACGATGGCCCATTCTCCACCGACACACACTCTTCCTCTCACTCGAAAACCCTTCCCGTCGTCAATGCCACTGCTTCCTCTCTCAAATTCCTCAACGCAACGTCCCTAACAGCTCTTCGGCGCGCCTCTCGAGAAACTAACGACGGCCAAACGGAGCTCCGGCATGTCGTGTTCGGAATCGCGGCGTCGTCGAAGCTGTGGGAGCAGAGGAAGAACTACATCAAACTGTGGTACAAGGCCAAGGAGATGCGTGGCGTGGTGTGGCTGGACAACAGAGTGAAGAAGGATGAGAACGACAACGGTGTGCTCCCGCCGGTGAGGATCTCCGGCGACACGTCGAAGTTTTCCTACACGAACCGGCAGGGTCACCGGTCGGCGATAAGGATCTCGCGAATCGTGTCGGAGACGCTGCGACTGGGGCTGAAGGATGTGCGGTGGTTCGTGATGGGGGATGACGACACCGTTTTCGTGACGGAAAACCTAGTGCGGATTCTGAGAAAGTACGATCATAACCAGTTCTATTACATTGGGAGTTTATCAGAGAGTCATTTGCAGAACATTTTCTTCTCTTATGGCATGGCTTATGGTGGAGGAGGTTTCGCTATCAGTTACCCTTTGGCTAAAGCTCTTCACAAAATGCAGGATCGTTGCATTCAGAGGTACCCGGGACTGTACGGCTCCGATGACAGAATGCAAGCTTGTATGGCCGAACTCGGTGTTCCACTCACCAAAGAAATCGGTTTTCACCAGTATGATGTGTATGGGAACTTGTTCGGTCTTCTTGCAGCTCATCCTGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCCAATGTGACTCGGGTGGAAGCCCTTCAACAGCTTACCATACCAATGAAGCTTGACTCAGCTGGGCTCATGCAGCAATCCATCTGTTACGACAAATCAAAGAGCTGGACCCTTTCCGTTTCATGGGGTTTTGCTGTTCAGATATTTCGTGGTGTGTTTTCACCCCGGGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCAGATTACACTGCATATGCATTTAACACGCGTCCAGTTAGTAGAAATCCATGCCAGAAGCCTTTTGTATTTTACTTCTCAAAGGCAGAATACAATTCTACAATGCAAAAGACAGTGACTGAATATGAAAGGCATCGTGTCCCTCACCCGGAATGCCGGTGGAAAATGGCTGATCCTTCTTCTCTTGACAAAGTGGTCATATATAAGAAGCCAGATCCGCATCTATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTGTTGAAATCAAAGGATAAAGGAACCGTGGTGATAGATGTGGGAATGTGTAGGGAAGGTGAGGTAAGCGAGGCATAG 1593 0.4953 MKVGEKESEKLIWEQMRSPKSGTPIAGGVAVAQSRTLHRLLFLLILFVTVTYVVYTLKLISTSRACHDGPFSTDTHSSSHSKTLPVVNATASSLKFLNATSLTALRRASRETNDGQTELRHVVFGIAASSKLWEQRKNYIKLWYKAKEMRGVVWLDNRVKKDENDNGVLPPVRISGDTSKFSYTNRQGHRSAIRISRIVSETLRLGLKDVRWFVMGDDDTVFVTENLVRILRKYDHNQFYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALHKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVTRVEALQQLTIPMKLDSAGLMQQSICYDKSKSWTLSVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAEYNSTMQKTVTEYERHRVPHPECRWKMADPSSLDKVVIYKKPDPHLWDRAPRRNCCRVLKSKDKGTVVIDVGMCREGEVSEA. 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06521 530 Gene3D - 109 368 - -
Seca12g06521 530 FunFam Fringe-related protein-like 109 365 - -
Seca12g06521 530 Pfam Protein of unknown function, DUF604 251 504 IPR006740 -
Seca12g06521 530 PANTHER FRINGE-RELATED 37 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06521 Seca-Chr12 157223556 157226951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06521 1 530 Glycosyltransferase AT4G23490 67.904 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06521 - - gmx:100818244 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06521 12 157223556 157226951 Seca12g06521 12 157223556 157226951 ECH
Seca12g06521 12 157223556 157226951 Seca12g06521 12 157223556 157226951 PCT