Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06502 ATGGCACGCTTGGTTCTGCCATCGAAGACTCTGGCTTTTTCAAGGAAGAGTTTACTGGGTTTGATCTCCCCTGCTCCTGTTCAGGTCAATTGCTGCGTTAATTATTTTCAGAATACAGCAAAAAATAGCATCAGATTCAGGCATTTCTTTGCATCAGAGGTCATTTTGCGAAAGAAGTTTTGCCCCTTTAATTCTTCTCTACCAAGGGTCAAGCAAGCGAGGAGGAGGCTAATTTGTTCAGTTGCCACAGAAGATTTACCAAAGCAAGGTGAAGAATCTAAAATGGAGATACCAAGAGAAATATTCTTAAAGGATTACAAAATGCCTGATTACTATTTTGACACAGTGGATCTGAAATTTTCCTTGGGAGAGGAAAGGACAATAGTTAGTTCTAAAATTGCTGTGTTTCCTCGTGTTGAAGGCTCTTCTCCCCCACTGGTTTTAGATGGACAGGACTTATCTTTAGTTTCAGTTCAGCTTAATGGCAAGGCTTTGAAGGAGGAAGACTATCACTTGGATGCACGCCATCTAACAATCCGATCACCTCCTAGCGGTAAATATGATCTTGAAATCGTTACTGAGATCTACCCGCAGAAGAACACATCATTAGAGGGACTTTACAAGTCATCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATTACATTTTATCAGGATCGGCCTGATATAATGGCAAAATATACAGTACGCATTGAGGCAGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTGGCTGAACAAGGTGATTTGGAGGATGGCAAACATTATGCTGTTTGGGAGGACCCCTTCAAGAAACCTTGTTATTTGTTTGCCTTGGTTGCTGGGCAATTGCAGAGCAGAGATGACACATTTATTACCCGTTCAGGAAGGAAAGTGTCCCTTAGAATCTGGACACCTGCAGAAGATGTACCTAAGACTGCACATGCGATGTATTCTTTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAAAACAAGAGCTTGAATATTTTCAATTCCAAGCTTGTATTGGCTTCTCCAGAAACTGCTACCGATGCAGATTATGCTGCAATATTGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACCGTTTTTCGTGATCAGGCACAACCTCTTTACCTCAGTTACTATGAATTCTCCTCTGACATGGGAAGTCGTACTGTAAAGCGGATTGCTGATGTTTCAAAACTTCGAAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGGCCACACTCTTACATCAAGATGGACAACTTTTACACAGGCAAGCTTCTTTATTTGTAG 1470 0.4238 MARLVLPSKTLAFSRKSLLGLISPAPVQVNCCVNYFQNTAKNSIRFRHFFASEVILRKKFCPFNSSLPRVKQARRRLICSVATEDLPKQGEESKMEIPREIFLKDYKMPDYYFDTVDLKFSLGEERTIVSSKIAVFPRVEGSSPPLVLDGQDLSLVSVQLNGKALKEEDYHLDARHLTIRSPPSGKYDLEIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAEQGDLEDGKHYAVWEDPFKKPCYLFALVAGQLQSRDDTFITRSGRKVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQAQPLYLSYYEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGKLLYL. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06502 489 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Seca12g06502 489 PRINTS Membrane alanyl dipeptidase (M1) family signature 223 238 IPR001930 GO:0006508
Seca12g06502 489 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Seca12g06502 489 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Seca12g06502 489 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Seca12g06502 489 Gene3D Neutral Protease Domain 2 377 488 IPR027268 -
Seca12g06502 489 Pfam Peptidase M1 N-terminal domain 116 283 IPR045357 -
Seca12g06502 489 Pfam Peptidase family M1 domain 325 427 IPR014782 GO:0008237|GO:0008270
Seca12g06502 489 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Seca12g06502 489 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 483 IPR012779 GO:0008270
Seca12g06502 489 FunFam Putative aminopeptidase N 293 376 - -
Seca12g06502 489 CDD M1_APN 105 483 - -
Seca12g06502 489 FunFam Aminopeptidase N 108 291 - -
Seca12g06502 489 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 99 289 IPR042097 -
Seca12g06502 489 Gene3D - 292 376 - -
Seca12g06502 489 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06502 Seca-Chr12 157040435 157044833 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06502 K01256 - gmx:100775476 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06502 12 157040435 157044833 Seca12g06502 12 157040435 157044833 ECH