Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06500 ATGAGAAGAGCTCATATGGATGATGGTAGAGCTGTCAACAACACTTTGGACACTATCAACGCTGCTGCCTCTGCCATAGCCTCAGCCTCAGCCCAGAATCGCGTTTCTCAACCTGCTTCCCAGCAGAAGAAAAGATGGGGAAGCTGGTTGAGCATATCCGGGTGTTTTGGTTATCAAAAAAACCGAAAGCGCATTGGGCATGCTGTCCTTGTTCCAGAAACTGCACCTGATGGAGCAGATCCTACTGCAGCAGTTAGTTCAACCCAAGCACCTAGTATAACACTTCCCTTCATTGCACCTCCCTCATCTCCTGCATCTTTCTTTCAATCAGAACCTTCTTCAATTGTACACTCACCAGTTGGTATACTCTCTGTCACTTCTGTGTCTGCAAGCATGTACTCCCCTGGTGGCCCTGCCTCAATATTTGCCATTGGACCTTATGCTCACGAAACACAACTAGTTTCACCGCCTGTTTTCTCAGCATCATCAACTGCTCCTTTCACTCCACCTCCTGAGTCTGTCCACTTGACTACACCTTCTTCACCCGAGGTGCCATTTGCTCAGTTACTTGACCCCAACATTAGGAATGGTGAGACCTTTCAGAGGTTCCAAATATCTCACTATGACTTTCAATCTTATCAGTTTCATCCTGGAAGCCCAGTTGGTCAACTCATATCACCAAGATCTGCCATCTCAGCTTCTGGCACCTCATCTCCTTTCCCTGACTCTGAGTTCGCGGCCGGTGGCTCCCCTATCCTTGATTTCAAAACAACAGACCCTTCTAAGCTTTTTAATTTGGATAGACTCTCCTCTTATGAAAACCAGAAGTCAAATCAAGGTTCTGGGTCTCTAACCCCAGATACTGTAAGGTCAACACCTCAAGCTGGTTTTCTTCCAAATCACTGGGTTTCTGAGATCAAATTGTCCCCACATCCAAGTAATAATCGCCTGAATGAGATTAGTGTAAATCATAGGGTCTCATTTGAATTATCTTCCCAAAAAGTATTGACATCTGTGGAAAACAAGCCAACAGCATCAGCATGGACTAAAGTCCTGTCAAAGTTAAAACATGAGGCACCAACAGCAGATAAAGAAGAAAATTCAAGAGAAAAAAGTGGGTGTGATGACAAACAAGTTGTTGCTGAAACTTCCAATGATGCACAGAAGCAAACGACCACTTTGGGTGGAGATGATGCAACAGATCATGAGAAGGATCAGTCCTTAACCCTTTCTTCTGGTAAAGAATTCAATTTTGATAATACAGAGGGAGGAGATTCTCATGCACCCAATATAGTTGCTGATTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAAGGAGGGGCCTCCACCAAGAATTGGTCTTTCTTCCCAATGAGTGTCACCGTGTCAGCTAACCAATAA 1401 0.4483 MRRAHMDDGRAVNNTLDTINAAASAIASASAQNRVSQPASQQKKRWGSWLSISGCFGYQKNRKRIGHAVLVPETAPDGADPTAAVSSTQAPSITLPFIAPPSSPASFFQSEPSSIVHSPVGILSVTSVSASMYSPGGPASIFAIGPYAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPNIRNGETFQRFQISHYDFQSYQFHPGSPVGQLISPRSAISASGTSSPFPDSEFAAGGSPILDFKTTDPSKLFNLDRLSSYENQKSNQGSGSLTPDTVRSTPQAGFLPNHWVSEIKLSPHPSNNRLNEISVNHRVSFELSSQKVLTSVENKPTASAWTKVLSKLKHEAPTADKEENSREKSGCDDKQVVAETSNDAQKQTTTLGGDDATDHEKDQSLTLSSGKEFNFDNTEGGDSHAPNIVADWWANEKVAGKEGGASTKNWSFFPMSVTVSANQ. 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06500 466 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 10 459 IPR040420 -
Seca12g06500 466 MobiDBLite consensus disorder prediction 378 395 - -
Seca12g06500 466 MobiDBLite consensus disorder prediction 272 296 - -
Seca12g06500 466 MobiDBLite consensus disorder prediction 162 181 - -
Seca12g06500 466 MobiDBLite consensus disorder prediction 358 377 - -
Seca12g06500 466 MobiDBLite consensus disorder prediction 358 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06500 Seca-Chr12 157026662 157029989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06500 - - gmx:100791666 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06500 12 157026662 157029989 Seca12g06500 12 157026662 157029989 ECH
Seca12g06500 12 157026662 157029989 Seca12g06500 12 157026662 157029989 PCT