Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06496 ATGGCAACTCCATTCATGCTTTCCCAAGACAACATTGAATTGCAGTTTGCAACCAATCATTTAGGCCATTTTCTCTTGACAAACCTTTTATTAGAAACTATGAAAAAAACTGTACGGGATTGCAACCGGGAAGGAAGGATAGTAATTCTATCATCAGAGGCACACAGATTTGCATATCGTGAAGGGATTCGTTTTGATAAAATTAATGATGAATCAGGATACAGCAGTTATTTTGCTTATGGACAATCAAAACTTGCTAATATTTTGCATGCAAATGAGCTTGCAAGGCGCTTGAAGGAAGAAGGAGTGGAAATAACTTGCAACTCCCTTCATCCTGGGTCAATTATTACAAATATTCTGCGATACCATGATTATGTTAATGGTCAGTATCTATGGTTGTATACCATTCAGTTAGTCGCTAAGTTTGTTTTCATTGCTAATATGGTCGGCAAGTACTTCCTTAAAAATGTGCAACAGGGAGCTGCAACTCAATGTTACGTGGCATTGCATCCACAAGTCATGGGAATATCTGGTGAATACTTTATGGATAGCAACAAGGCAAACCCAACCACTCTGGCTAAAGATTCAGAGCTTGCTAAAAAGCTATGGGAATTCAGCTTAAGCTTGACTAATCCAAAGTAG 642 0.3832 MATPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTVRDCNREGRIVILSSEAHRFAYREGIRFDKINDESGYSSYFAYGQSKLANILHANELARRLKEEGVEITCNSLHPGSIITNILRYHDYVNGQYLWLYTIQLVAKFVFIANMVGKYFLKNVQQGAATQCYVALHPQVMGISGEYFMDSNKANPTTLAKDSELAKKLWEFSLSLTNPK. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06496 213 Gene3D - 1 213 - -
Seca12g06496 213 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 185 IPR036291 -
Seca12g06496 213 PANTHER RETINOL DEHYDROGENASE 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06496 Seca-Chr12 156981828 156983539 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06496 - K19329 gmx:121174911 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06496 12 156981828 156983539 Seca12g06496 12 156981828 156983539 ECH