Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06486 ATGGGAGACAGAGAAGAACAAGGCGAAGGCCATGTCGCCTCCTCAGAGCGAGAGGATTCCAATCCAGAAGCAGAAACCCCAATTGCCTTCAATAATCAGAATGAAATTCTGAGAGCCATTGAGGTTGTGGAAAGAGACTCCTTGGCCATCGCTCAGAGCTTCACTTCTCTCTTCGCCTCCCTCCGATTAGCACTCTCCCAATCCACCACCGCCTCTCTCCATCACATCCAATGCTTCACTGATGCCACTGGTCGCCTTCAGGAATCTGTGCTTGACGCAGCAACCAAGGGGAATCGGTATATAAATTCCTGTCTCAGGTTGAATGAGGAGATGAAGAACATTGATGGTCTAGCGTCCCAACTGTATCCAATTATTTGCTATTTGTCAACTAATTTATTTTACCCTTTTCTTCATGCATTTTGA 423 0.4657 MGDREEQGEGHVASSEREDSNPEAETPIAFNNQNEILRAIEVVERDSLAIAQSFTSLFASLRLALSQSTTASLHHIQCFTDATGRLQESVLDAATKGNRYINSCLRLNEEMKNIDGLASQLYPIICYLSTNLFYPFLHAF. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06486 140 Pfam BLOC-1-related complex sub-unit 6 C-terminal helix 38 124 IPR046465 -
Seca12g06486 140 MobiDBLite consensus disorder prediction 1 23 - -
Seca12g06486 140 MobiDBLite consensus disorder prediction 1 28 - -
Seca12g06486 140 PANTHER OS07G0483400 PROTEIN 14 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06486 Seca-Chr12 156910176 156911042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06486 - - gmx:100305606 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06486 12 156910176 156911042 Seca12g06486 12 156910176 156911042 ECH