Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06482 ATGGGACAAGAGTTGGAGTTGGATCTCAATGACAAGTCTTCAGAAGGTCTTAGTCCCAATACTGTTCTTCCATCTCATCAATATTGTGCCAATGTAAAGAAGATATCTAAAAAAGGAAAACCCACAGGGAAAGATGAATTTTTTACCCTCAAGGGGGACTTTGCAGAGATCAAATTTGCTCGCTTTCGTAGTTCTTCATGTAAGAGTCATCTCTCTAGACCTCATGGATTGGAAGGTAATGTAGAAACAAGGAGAGGTTCCACGTATCAAAGTTCAGAGGAAGTAAAATATATAAAGAAAATGGGCACCATTGTAGGAGGAAGGAAAAAAATAGAAATTTCAAGGAGCAGTGACACCTCTTTCTCGGGTAGCATTGTTGATTCTTTATGTGGTTCAGATGATGAAGATTCCAGGCAGAGACCTTCAGATATATCTCAGGATTCAAATTTGGGTTCCCCATATGTTTCCAGGTCCTGGGCTTGCAAGGAGGCAGACTCTCCAAATGGCTTTATTGAATTTTGCATACAATCAGATGTTAAGAATAAAAACTCCAGTGCAGTAGAAGGGAGAGATTCTATAAAGTCCAGAAGAGATAAAGTTGCTGATTCTCTAATTAATGGCAATTCTCTTCATGAAAAGCACAAAATCCACTCATTGCCAAAGTCACTCTCTGCTAAGGTGGAAGTTTCTCACTTGCTATCTCCGTTGGGAAGTGATTGCTCATCCAGAGCACGTCCGAAAGTCCAATTCACCCATGTTAGGAAAAGGATGGATCATTTCACAAAGTCAAAATCTTTGAGAAGTCCAGTGAGTCGTATGATGGAAACTAATGAGGTCAAATCAAATGAAACAGCAAACGTTACAAGAAACAGGACTTATCAGAAATATTTGCCAAATGACTTATCTAACACAGGAAAGCATTCTGACATTATTTCTGAATTTATCAACAGAGAAATCCAGTATTCAGGTATAGCATCTTCACCAGTTCACCTGCATGGTAATCTCAAGTTGGAAAACAAACATGGAGTGCCTTTTTTTGAGTTCAAGGTGAAGTGCCCTGAAGAAGTATTTGTGGCCAAGACATGGAGAGTAGGTAATTCTTTCAATTGGGTATATAGCTTTCACTCTGTTGATAATAGAAAGAAGTGCAATGCCAATGGGTTGGAATCCCATGATTTTGACAAAGATTCCTCAATAGTAGCACAGATGCTAGTTTCCTGTAATTTATGTTCTGAACTAGAAGACAGAGTATTTGACAACTCTATGATGACAGAATTTGTGTTGTATGACCTTACACACTCAAGACATAGCATTTCATCTGAAAAAAGGTCTTTCTGTGAACAAGATGCTTCTAAAATGCTTAAAGCTTCCAGTGTTGGATTGAAGGAAGAAACTTCTAGGCTGGATGAAGAGAACCTTGCAGTCAAAAACAATCTTCAAGATAAACCTCTATCAAGCAATGTTGATTTTGATGATTCAAGTTCTTATCCTTTGTTGCCCACCAAATCCAATTCAAATCTTGAAATTGCTGCCATTGTCTTGCAAATTCCATTTTCTAAGAGAGAGAGCTTGAAATACAAGAGAGCGGATAGACTAAGTGCCAAAGAATATTCCAACATAGGCGATCTCTCTGCAGTAGTAGATCAGAGTAGAAAGAGTCTTCATGACAGCAAAATCCAGGAACAGGTGAAGGTGGTAATACCATCTGGCAACCATGGTTTGCCAAATGCTGAAAGCCGGGGTCCCTCATCATTACTTGATCGATTGAGACATGGTGGAGGTTGTGACTGTGGTGGTTGGGATATGGCCTGTCCACTTATACTTTTGGGCAATCCTAGTATTCAATTTGCCGAAGACCACTCACTTATGGAGGAATATCAACCACTGGAACTTTTTGTTCAGGTACAACTTGAATTTCACAGCAACTGTTTCTTAAAAGGGACTTAA 1947 0.3919 MGQELELDLNDKSSEGLSPNTVLPSHQYCANVKKISKKGKPTGKDEFFTLKGDFAEIKFARFRSSSCKSHLSRPHGLEGNVETRRGSTYQSSEEVKYIKKMGTIVGGRKKIEISRSSDTSFSGSIVDSLCGSDDEDSRQRPSDISQDSNLGSPYVSRSWACKEADSPNGFIEFCIQSDVKNKNSSAVEGRDSIKSRRDKVADSLINGNSLHEKHKIHSLPKSLSAKVEVSHLLSPLGSDCSSRARPKVQFTHVRKRMDHFTKSKSLRSPVSRMMETNEVKSNETANVTRNRTYQKYLPNDLSNTGKHSDIISEFINREIQYSGIASSPVHLHGNLKLENKHGVPFFEFKVKCPEEVFVAKTWRVGNSFNWVYSFHSVDNRKKCNANGLESHDFDKDSSIVAQMLVSCNLCSELEDRVFDNSMMTEFVLYDLTHSRHSISSEKRSFCEQDASKMLKASSVGLKEETSRLDEENLAVKNNLQDKPLSSNVDFDDSSSYPLLPTKSNSNLEIAAIVLQIPFSKRESLKYKRADRLSAKEYSNIGDLSAVVDQSRKSLHDSKIQEQVKVVIPSGNHGLPNAESRGPSSLLDRLRHGGGCDCGGWDMACPLILLGNPSIQFAEDHSLMEEYQPLELFVQVQLEFHSNCFLKGT. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06482 648 Pfam Domain of unknown function (DUF3527) 328 634 IPR021916 -
Seca12g06482 648 MobiDBLite consensus disorder prediction 130 153 - -
Seca12g06482 648 MobiDBLite consensus disorder prediction 1 22 - -
Seca12g06482 648 PANTHER EXPRESSED PROTEIN 6 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06482 Seca-Chr12 156872833 156877745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06482 - - gmx:100778683 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06482 12 156872833 156877745 Seca12g06482 12 156872833 156877745 ECH
Seca12g06482 12 156872833 156877745 Seca12g06482 12 156872833 156877745 PCT