LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g06472	ATGACCAACTCAAATTATGTGGAGTTGAATCAGCTATATGACAAGTACAAAGACAAAGGCCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGTGAGGAAGAACCCGGAAGCAATGATCAAATTGTGGAGTTCGTCTGCACCCACTTTAAATCGGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATTCTGCTCCTTTATATAAATTCTTAAAGTCTGGTAAGTGGGGAATTTTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTGACAAGGATGGGCAAGTGGTGGATCGCTATTATCCCACGACTTCTCCTCTTAGCCTTGAGAGAGACATCTGTAAGCTACTTGGTATTGCATAA	378	0.4101	MTNSNYVELNQLYDKYKDKGLEILAFPCNQFGEEEPGSNDQIVEFVCTHFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDICKLLGIA.	126

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca12g06472	125	ProSitePatterns	Glutathione peroxidases signature 2.	24	31	IPR029760	-
	Seca12g06472	125	Pfam	Glutathione peroxidase	2	75	IPR000889	GO:0004602\|GO:0006979
	Seca12g06472	125	CDD	GSH_Peroxidase	2	118	IPR000889	GO:0004602\|GO:0006979
	Seca12g06472	125	PRINTS	Glutathione peroxidase family signature	86	95	IPR000889	GO:0004602\|GO:0006979
	Seca12g06472	125	PRINTS	Glutathione peroxidase family signature	21	37	IPR000889	GO:0004602\|GO:0006979
	Seca12g06472	125	FunFam	Glutathione peroxidase	1	124	-	-
	Seca12g06472	125	ProSiteProfiles	Glutathione peroxidase profile.	1	125	IPR000889	GO:0004602\|GO:0006979
	Seca12g06472	125	PIRSF	Glutathion_perox	1	124	IPR000889	GO:0004602\|GO:0006979
	Seca12g06472	125	SUPERFAMILY	Thioredoxin-like	2	122	IPR036249	-
	Seca12g06472	125	Gene3D	Glutaredoxin	1	124	-	-
	Seca12g06472	125	PANTHER	GLUTATHIONE PEROXIDASE	1	122	IPR000889	GO:0004602\|GO:0006979

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g06472	Seca-Chr12	156746768	156748273	Dispersed/Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g06472	K00432		-	gmx:100808523	244.973

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca12g06472	12	156746768	156748273	Seca12g06472	12	156746768	156748273	ECH
	Seca12g06472	12	156746768	156748273	Seca12g06472	12	156746768	156748273	PCT