Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06470 ATGCTTATTAGTACTTGTTCAACTCGCATCTTGTTCGTCAGAAGAACTATAAGATTAGCAGCTCCTGTTTCTTCTTCTTCCCTTCACTTGTTATCCAATAATCCCAACCATTACCTTAACCTCTCGCGTCCTTATCATACTTCTCTCTTTAGTGTTCCAATCAAACCCAAAACACTTGTTTTAACTCCAACCCCTTTGTCTTTCACTTTCAGAACAGATCACATTATGGCCACCCCATCATCAAACCCCAAATCAGTTCATGATTTCACCGTTAAAGATGCCAGGGGAAATGATGTTAATCTTGGCGACTACAAAGGAAAGGTTCTTTTGATTGTCAATGTTGCCTCACAGTGTGGCTTGACTAATTCAAATTACACAGAGCTGAGTCAGTTGTATGAGAAATACAAACAGAAAGGTCTGGAAATTCTGGCATTCCCTTGCAATCAGTTTGGGGCTCAGGAGCCTGGAACTAATGAACAGATACAAGAGTTTGTTTGTACTCGCTTCAAAGCTGAGTTTCCCGTTTTTGACAAGGTATAA 540 0.4019 MLISTCSTRILFVRRTIRLAAPVSSSSLHLLSNNPNHYLNLSRPYHTSLFSVPIKPKTLVLTPTPLSFTFRTDHIMATPSSNPKSVHDFTVKDARGNDVNLGDYKGKVLLIVNVASQCGLTNSNYTELSQLYEKYKQKGLEILAFPCNQFGAQEPGTNEQIQEFVCTRFKAEFPVFDKV. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06470 179 PRINTS Glutathione peroxidase family signature 140 156 IPR000889 GO:0004602|GO:0006979
Seca12g06470 179 PRINTS Glutathione peroxidase family signature 104 121 IPR000889 GO:0004602|GO:0006979
Seca12g06470 179 CDD GSH_Peroxidase 85 179 IPR000889 GO:0004602|GO:0006979
Seca12g06470 179 FunFam Glutathione peroxidase 77 179 - -
Seca12g06470 179 SUPERFAMILY Thioredoxin-like 85 179 IPR036249 -
Seca12g06470 179 PANTHER GLUTATHIONE PEROXIDASE 80 179 IPR000889 GO:0004602|GO:0006979
Seca12g06470 179 ProSiteProfiles Glutathione peroxidase profile. 76 179 IPR000889 GO:0004602|GO:0006979
Seca12g06470 179 ProSitePatterns Glutathione peroxidases active site. 106 121 IPR029759 -
Seca12g06470 179 ProSitePatterns Glutathione peroxidases signature 2. 143 150 IPR029760 -
Seca12g06470 179 Gene3D Glutaredoxin 70 179 - -
Seca12g06470 179 Pfam Glutathione peroxidase 86 179 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06470 Seca-Chr12 156740923 156744057 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06470 K00432 - gmx:100306295 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06470 12 156740923 156744057 Seca12g06470 12 156740923 156744057 ECH