Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06462 ATGGCTAAGGTTTATCCTCAAGAACCCACATCCACATCCCTCACCTCTAAAAGAGAAACATACACTCTATGGATGAAATCACTTGTTTTCCACTCTAATGGCTGCACTGTCTATGATTCCAATGGTGACATCGTTTATCGAGTTGATAACTATGACAGAAAAGGTACAAGAGAAGTCAATCTCATGGATCTACGAGGCAAAATTCTCTGCACCATAAAAAAGAGATTACTAGCTTTTGGATGTTGGGAAGGCCTAAGATATTGCAGCAGTTCTAGTAATTGTAAAAGCCTGGAAGAGGAGCAAGAACAACCATGGTTTCAAGTTAAAAGATGTCATAATATGATCAAAGGGAAAGTAGCATGCCAAATTAAAGTGGGGTCTCAAAAATACTGCATAGTAAGAATCAATGGAAGCAAAACAGCAGCATTCCGGATAGAAAACAATGATGGACAGATAGTTGCTGAGGCAAAGCAGAAGCACTCAGCTTCAGGGGTTGTCCTGAGTAATGATGTTCTAGCGTTGGATTTGGCTGCTGGAACAGATCATTCCCTCATAATGGCTTTGGTGACTGTGTATGGATTGATATGTGGGATAATGTAA 600 0.4017 MAKVYPQEPTSTSLTSKRETYTLWMKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGTREVNLMDLRGKILCTIKKRLLAFGCWEGLRYCSSSSNCKSLEEEQEQPWFQVKRCHNMIKGKVACQIKVGSQKYCIVRINGSKTAAFRIENNDGQIVAEAKQKHSASGVVLSNDVLALDLAAGTDHSLIMALVTVYGLICGIM. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06462 199 SUPERFAMILY Tubby C-terminal domain-like 13 196 IPR025659 -
Seca12g06462 199 PANTHER - 19 196 IPR007612 -
Seca12g06462 199 Pfam LURP-one-related 11 191 IPR007612 -
Seca12g06462 199 Gene3D - 11 197 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06462 Seca-Chr12 156680236 156685095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06462 - - gmx:100527667 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06462 12 156680236 156685095 Seca12g06462 12 156680236 156685095 ECH
Seca12g06462 12 156680236 156685095 Seca12g06462 12 156680236 156685095 PCT