Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06461 ATGTTCAGATGGAGGAGTGAGAGAAACAGGGTCAAAGCTGTTTTCAAACTCCAATTCCATGTCACCCAGATGCTGCAATCTGGGGTGGATGCTTTGGTGCTCTCTATAGTTCCTGGGGACATTGGAAAACCAACTACCAGATTAGAGAAAGCTACAGTTCGTGGTGGAGTATGTAAATGGGAGAATCCTGTGTATGAAACAGTCAAGTTTAATCAGGATCCTAAGACTGGGAAATTCAGTGAAAGAATATATCATTTTGTGGTTTCAACTGGATTATCAAAAGCTAGCTCCTTTGGGGAAGTTTCTATAGATTTTTCTGATTATGCAGAGGCTACAAAGCTCTCCTCTGTCTCTCTTCCCATCAAGAACTCTCATTCTGAGGCTGTCTTGCATGTATCAATCCAGAGACTACAAGAAAATAATGACAAAAGAGAGGAAGAGGAATGTGAAGATGGCAAGCTAAAACCCAATGATAGGAGCTTGAGAACCTATTTAAGCAATGGAGATGCAGATGGACGTAGTAAAAGTGATTCTTCTGATGACGTGTCTGCCAAAGCAAACACCAATAGAGCTGAATTGAGTGCTGATTGTAGGACATCTAGTGGATCTGACATTACATTGTCAAGTTCTGATGGCAGCTCTGGACTTGATACTCCCCGTGAACTTGGACTAAGAAATACTACCATCCACCCCAACACAAATGGTTTTCTTTCAGATGTGAGCCACACTTCAGAGCCTCAAAAACCTGCTGTAAATGTCTCAGCATCAATGTATGATGTACATCAGAGATCACCCTGGGACTGGTCAGCCGGTTCAGAACATGGTCTAAGTATGGACGATTCAATAAATGCCCTTCCTAGGGAAAGATCCCAGCAGACATCTGATATGGAGAATGAAAAACTCAAGGCTGAAATTGCTGCTTTGGCCAGGCAGGTGAATGTGTCAGACTTGGAACTACAGACTCTTAGGAAGCAAATTGTAAAGGAGAGCAAAAGAGGGCAGGACCTCTCAAAGGAAGTCATCAGCTTGAAAGAGGAAAGAGATAAACTCAAGACAGAATGCGAAAATCTAAGGTCATTTCGCAAACGAATGGATGAGGCCAAAGTGAGTAATAGGCCACAATTGGAAAGCGGGGATCTCCAAACCCTTGTTGAAGAAATTAGACAAGAATTGAATTATGAGAAGGAACTGAATGCAAATCTCCGACTACAGTTAAAGAAGACACAGGAATCAAATGCTGAACTAGTTCTTGCTGTGCAGGACCTGGATGAAATGTTGGAGCAGAAAAATAGGGAAATATATAGTCTTTCCAATAAACATGAACAGAGTAAAAACTCCCATGAGTTAGGGAGAAACTTCTCAAATTGTGGAACAGATGATGATGAAGAACAGAAGGAATTGGATGAGCTTGTTAAGGAGCACAGCAGTGCCAAGGAGACACACTTACTTGAGCAAAAAATCATAGATCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAGATATTGAAACAGGAAAACCATGACATTGCATATAAGCTGGAACAGAGCCAACTGCAAGAACAGTTAAATATGCAGTATGAATGCTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTGCTGCTGTAGATGACATTGAGACCCATATCCAGAATCTGGAAAATCAACTCAAGAAACAGTCAGAAGAATTCTCAAATTCTCTGGCTACCATCAAGTCACTTGAAGCCGAAATCAGCAGATTAGAGGAGGAACTGGAGAAACAAGCCCAAGGATTTGAAGCTGATCTAGATTCTGTGACACGTGAGAAAATTGAGCAGGAGCAAAGAGCCATCCGAGCAGAGGAAGCTTTGCGAAACACCAGACATAAAAATGCTAATACCGCTGAGAGGCTTCAAGAAGAATTTAAAAGGCTGTCAATGCAAATGGCTTCTACATTTGACGCAAATGAGAAGGCTACCATGAGGGCATTGACAGAAGCAAGTGAACTTCGAGCGCATAAAAGACTACTGGAAGAAATGCTGCATAAAGTAAAAGCGGAGCTTCAGTCAGCCAAAGCTGATCATAAGGTAAAACTGAATGAACTTTCCAACAAAATAGATATGATGACAGTTCAAATACAACAGATGTTGATGGAAATTGAGGACAAGTCCAAGCAACTTGAAAATCAGAGAAAGCATGAGGAACAAGTCAGCAGGGATTACTCTGAGGAGATCCAGATGCTAAAAGCTGAGAATGAGAAGCTTAAAGTGGAGATTTCATGCCTCTCTGAGCAAGTAAAACAAAAAGAAATCTTAAGAACTGACTTAGAATTTATGAAGAAATCGCTTGAGGAATCTGAGAGCCTGTTACAGGGTAGAATGGTGGAAAGAAATGAGCTGGTGATTACAATTGCTTTATTGAAGAAGGAAGCAGAACGGTTACTTGATGAGCTAAATAGGATGATGCATCTCAAGGATGAAGAAGAGAAAATGGGTAGACTCTTGAATTCAGAGTTAGAAGCACTTAAAGCTCAACATAGTGACCTGAGACATTCTCTAATTGAGGGTGAGACTGAGAAAGAAAAACTAAGAAAGCAAGTTTTGCAGCTAAAAGGTGAATTAAAGAAGAAGGATGATGCATTAACCAACATTGAGAAGAGGTACAAGGATAGTAATGGACGCACACAGCTTTCTGATGGAACAAAAACCATTCCGAAGAACAAAAAAAGTGCTTCAATTACTCAGAATTCAAAAGAATTGACAAATCTGATGGAGAAAATAAAAATGCTCGAGGGCCTGATACAGTCAAAGGAAACTGCCTTGGAAACATCAGCTTCTTCCTTTTTGGCGAAGGAAAGGGAACTTCAATCCAAAATTAAGGAACTGGAGGACAAAGTGGAGGAATTCAATCAGAGTATTGCTTTGCAAAAGGTTCTTGAGGATAAGAGTATTACTACTACTTCAGATGATAGATCTGAAGAAAGAGGTTCAGTTGAGCATCTCAATGATACTACATGTGTGTCCCAAGAAAATGAGGTCGCAGTTTCATCATTCAATAGTGATGTAAATTTGTCAGAGAAAGAAGCAGAAATATCCATAAAGGACAATAATGGGGATGGCAGCCCTTGTGACATTTTAACTGAGTTATCATCATTGAAGGAAAGAAATGAATCAATGGAATCTGAACTGAAAGAGTTGCAAGAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACAGTACGAAGCCTCAAGAATGCTCGGAAGGGCTAA 3330 0.4057 MFRWRSERNRVKAVFKLQFHVTQMLQSGVDALVLSIVPGDIGKPTTRLEKATVRGGVCKWENPVYETVKFNQDPKTGKFSERIYHFVVSTGLSKASSFGEVSIDFSDYAEATKLSSVSLPIKNSHSEAVLHVSIQRLQENNDKREEEECEDGKLKPNDRSLRTYLSNGDADGRSKSDSSDDVSAKANTNRAELSADCRTSSGSDITLSSSDGSSGLDTPRELGLRNTTIHPNTNGFLSDVSHTSEPQKPAVNVSASMYDVHQRSPWDWSAGSEHGLSMDDSINALPRERSQQTSDMENEKLKAEIAALARQVNVSDLELQTLRKQIVKESKRGQDLSKEVISLKEERDKLKTECENLRSFRKRMDEAKVSNRPQLESGDLQTLVEEIRQELNYEKELNANLRLQLKKTQESNAELVLAVQDLDEMLEQKNREIYSLSNKHEQSKNSHELGRNFSNCGTDDDEEQKELDELVKEHSSAKETHLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSQLQEQLNMQYECSSPPPPPPPPPAAAVDDIETHIQNLENQLKKQSEEFSNSLATIKSLEAEISRLEEELEKQAQGFEADLDSVTREKIEQEQRAIRAEEALRNTRHKNANTAERLQEEFKRLSMQMASTFDANEKATMRALTEASELRAHKRLLEEMLHKVKAELQSAKADHKVKLNELSNKIDMMTVQIQQMLMEIEDKSKQLENQRKHEEQVSRDYSEEIQMLKAENEKLKVEISCLSEQVKQKEILRTDLEFMKKSLEESESLLQGRMVERNELVITIALLKKEAERLLDELNRMMHLKDEEEKMGRLLNSELEALKAQHSDLRHSLIEGETEKEKLRKQVLQLKGELKKKDDALTNIEKRYKDSNGRTQLSDGTKTIPKNKKSASITQNSKELTNLMEKIKMLEGLIQSKETALETSASSFLAKERELQSKIKELEDKVEEFNQSIALQKVLEDKSITTTSDDRSEERGSVEHLNDTTCVSQENEVAVSSFNSDVNLSEKEAEISIKDNNGDGSPCDILTELSSLKERNESMESELKELQERYSEMSLKFAEVEGERQKLVMTVRSLKNARKG. 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06461 1109 Coils Coil 298 318 - -
Seca12g06461 1109 Coils Coil 806 854 - -
Seca12g06461 1109 MobiDBLite consensus disorder prediction 137 247 - -
Seca12g06461 1109 Coils Coil 1058 1092 - -
Seca12g06461 1109 Gene3D - 829 1015 - -
Seca12g06461 1109 Coils Coil 954 988 - -
Seca12g06461 1109 MobiDBLite consensus disorder prediction 898 922 - -
Seca12g06461 1109 MobiDBLite consensus disorder prediction 137 158 - -
Seca12g06461 1109 Coils Coil 862 896 - -
Seca12g06461 1109 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1108 - -
Seca12g06461 1109 Coils Coil 559 639 - -
Seca12g06461 1109 Coils Coil 412 439 - -
Seca12g06461 1109 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 9 143 IPR019448 -
Seca12g06461 1109 Coils Coil 676 781 - -
Seca12g06461 1109 MobiDBLite consensus disorder prediction 225 247 - -
Seca12g06461 1109 MobiDBLite consensus disorder prediction 438 465 - -
Seca12g06461 1109 Coils Coil 487 521 - -
Seca12g06461 1109 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Seca12g06461 1109 Coils Coil 460 480 - -
Seca12g06461 1109 MobiDBLite consensus disorder prediction 181 216 - -
Seca12g06461 1109 MobiDBLite consensus disorder prediction 903 922 - -
Seca12g06461 1109 Coils Coil 929 949 - -
Seca12g06461 1109 Coils Coil 333 363 - -
Seca12g06461 1109 Coils Coil 384 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06461 Seca-Chr12 156670811 156676563 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06461 - - gmx:100819574 1623.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06461 12 156670811 156676563 Seca12g06461 12 156670811 156676563 ECH
Seca12g06461 12 156670811 156676563 Seca12g06461 12 156670811 156676563 PCT