Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06418 ATGGATGCTCGCGTCAAGGAGGAAGTATTGGAGATTCCAAATGCGTCAATTCGGCAAACAAACGGCGCTATTCCGCCGTTCCCTCCTGACTCGGTCATCGAACTCAGTAGCAGTAGTAGCAGCAGCAGCGATTCTGATTCCGATGGTGATTTGGACAGCGTAATCGCCAGCGCGGTGGAACGGGGAGGAGGGAGTCCGTACAAGAAGAGGAAGATGAACGATGTTTTGCCGGTTGGATTCCTAACCCCTCTCCCTCCGCCGCCGTCACAGCCGGTGCTTTCTCTTCCCGCACCAGAATGGGCTTCTAATTCGGCTGCGCGACCCAATGGTCGTTCGAGCAGCAACAAGCAGTTTTGGAAGGCCGGAGATTACGATGGCTCACCTGGCGGTGGTGGTTTCGAATCTTCAACCGTTGGTATGGATCACGTTAGAGTTCATCCTAAGTTTCTACACTCTAATGCCACAAGTCATAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATTCATTGGATGAGGTTTGTAATGGAGCCACATATGTTAATGTGGATATGCTTTTAAGTAAGAAAGATGGCAGCCGGATGCTGTTGATTGAAGATAATGGTGGCGGGATGGATCCTGATAAAATGCGTCAATGCATGTCACTGGGGTATTCTGTGAAAAGCAAATTGGCAAATACGATTGGACAATATGGAAATGGTTTTAAAACAAGTACCATGAGACTTGGGGCTGATGTAATTGTATTCTCGCGTTGTCAGGGGAAAGAAGGGAAGAGCTCTTCACAAAGCATAGGCTTGCTGTCTTACACATTTTTGAGGAGTACAGGAAAGGAAGACATTGTAGTACCCATGATGGACTATGAAAGAGAAGGACGAGAATGGAAGAAGATGATACGAACTTCTCTGGATGATTGGAATAAAAATGTTGAAACAATAGTTCAGTGGTCACCATTTTCCAGTGAGGCCGATCTTCTTCGTCAGTTCAACCTGATGAAGGATCATGGTACACGTGTAATTATATACAATCTTTGGGAGGATGACCAAGGTCAGCTGGAACTTGATTTTGATGCAGACCCACATGATATTCAAATAAGAGGCGTAAACCGAGATGAGAAAAACATACAGATGGCTAAAGAGTTTCCCAACTCTAGACATTTCCTAACTTATCGACATTCTTTAAGAAGTTATGCCTCAATTTTATATCTGAGGTTTCCTCCAGGCTTCCGAATTATTCTTCGTGGGAAAGACGTTTTGCATCACAATATAGTGAATGATATGATGATGTCTCAGGAGGTGACGTACAGGCCTCAATGTGGAGCTGCTGATGGGATTCCAAAGGATTCAAATATGGTTGCGATTGTTACTATTGGATTTGTCAAGGATGCAGTTCATCATATCGATGTTTCCGGGTTTAATGTTTATCACAAGAATCGACTCATTAAGCCATTCTGGAGGATCTGGAATCCAGCAGGAAGTGGTGGGCGTGGGGTCATAGGTGTGTTGGAAGCCAACTTCGTTGAACCTGCTCATGATAAGCAAGGCTTTGAGCGTACATTAGTTTTATCAAGACTGGAGTCACGGCTGATACAAATGCAGAAGAATTATTGGGGCTCTAACTGCCATAAAATTGGTTATGCTTCTAATCGAACTAAAAAACAAATCAACGATTCTGCTGATAAAGAGATATCTGATAATGTTCCAGAATCATCTCAATCCAAAAGGAAACATTCTGCCACAAATGGAAAGGCAACACCACTGGCTTCAGACAAACTGTATTCAGACTTGAAACAAAAACGGATACGAAAGGAAACAGAAAGATATAGCGCATACACAAATGGTAGACAAAGTTCATCTGAACAATCGTCATCTGATGATGATGCAAGTGATCAAATTAATGTTGTCTCGCCTAAGAAACAAGCGAAGGATGGTAGTCAAAAGATACCTAGTGCTGAAAAGTCATTTATAAATGAGAATGTATGTTATCAAGATACTGCACCAGCACCAAGTGGAAAAGCCTTGCGGTCCACACGAGGATCTAAGCTAAAGGAAAAAGATGATAATGATGGTGAGCAACCACTATCTGACTCTGATTTACCGACTTCAGAGCAGTTGAAAAAGGAGAATCGTGAGTTGAAGGAAAGATTAGAGAGGAAGGAGGAAGAAGTAGAGGAAGTATTGCAGGCTTTGCAGTATGAGAAAGACAGGTGTAAATCTCTCGAAACTCAGCTTCATGCTGCTGAACAAAAGATTGAAGATTTGAACAAGGAACAAGAAACTATTATTGACGTATTCTCTGAAGAAAGGGATAGACGTGATGCGGAAGAGAAAAATTTGAGAAAGAAGCTTCAGGATGCATCAAATACTATTCAAGAGCTGCTTGACAAGGTACGACTGCTCGAAAGGAAGTCTTCAAGCGGCAAATAA 2427 0.4289 MDARVKEEVLEIPNASIRQTNGAIPPFPPDSVIELSSSSSSSSDSDSDGDLDSVIASAVERGGGSPYKKRKMNDVLPVGFLTPLPPPPSQPVLSLPAPEWASNSAARPNGRSSSNKQFWKAGDYDGSPGGGGFESSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVNVDMLLSKKDGSRMLLIEDNGGGMDPDKMRQCMSLGYSVKSKLANTIGQYGNGFKTSTMRLGADVIVFSRCQGKEGKSSSQSIGLLSYTFLRSTGKEDIVVPMMDYEREGREWKKMIRTSLDDWNKNVETIVQWSPFSSEADLLRQFNLMKDHGTRVIIYNLWEDDQGQLELDFDADPHDIQIRGVNRDEKNIQMAKEFPNSRHFLTYRHSLRSYASILYLRFPPGFRIILRGKDVLHHNIVNDMMMSQEVTYRPQCGAADGIPKDSNMVAIVTIGFVKDAVHHIDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESRLIQMQKNYWGSNCHKIGYASNRTKKQINDSADKEISDNVPESSQSKRKHSATNGKATPLASDKLYSDLKQKRIRKETERYSAYTNGRQSSSEQSSSDDDASDQINVVSPKKQAKDGSQKIPSAEKSFINENVCYQDTAPAPSGKALRSTRGSKLKEKDDNDGEQPLSDSDLPTSEQLKKENRELKERLERKEEEVEEVLQALQYEKDRCKSLETQLHAAEQKIEDLNKEQETIIDVFSEERDRRDAEEKNLRKKLQDASNTIQELLDKVRLLERKSSSGK. 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06418 808 MobiDBLite consensus disorder prediction 701 720 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 32 50 - -
Seca12g06418 808 Coils Coil 776 803 - -
Seca12g06418 808 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 77 784 IPR045261 GO:0016887
Seca12g06418 808 MobiDBLite consensus disorder prediction 555 630 - -
Seca12g06418 808 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 162 362 IPR036890 -
Seca12g06418 808 MobiDBLite consensus disorder prediction 610 630 - -
Seca12g06418 808 Pfam Morc6 ribosomal protein S5 domain 2-like 392 537 IPR041006 -
Seca12g06418 808 FunFam MORC family CW-type zinc finger protein 4 146 350 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 555 572 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 16 70 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 662 720 - -
Seca12g06418 808 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 162 261 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 105 120 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 677 692 - -
Seca12g06418 808 Coils Coil 702 764 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 87 133 - -
Seca12g06418 808 Gene3D - 147 351 IPR036890 -
Seca12g06418 808 MobiDBLite consensus disorder prediction 593 609 - -
Seca12g06418 808 MobiDBLite consensus disorder prediction 573 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06418 Seca-Chr12 156191757 156205849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06418 - - lang:109358118 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06418 12 156191757 156205849 Seca12g06418 12 156191757 156205849 ECH