Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06417 ATGGAAATGCGTTCGACCAAAACATCCTCCTTGTTCTTCTTCGGAATGCTCGCTTTTGTCGCAGCTTTGAGTGGCGGGGCTGCGACCAAGGTGTACTCTTCCCAGCAAGAAACTAAGGACACTCTCTCTACTATGCATCACACACATAGCCATCTTGGTAGTGCAATAGAAACATATCCTATTCCTAGCACGAGAAATGGAAGGGCTCAGAAGAGGTGCAGAAAGGGAGATATTGAAATACAGCAAGGTCCCACAGAGCCACTCCCAAATGGGATTCCGACATACACAGTTGAGATAACAAATATATGTGTGAATGGGTGCAGTGTCTCTAACATTCACATTGCCTGTGGAAAGTTCAGTTCTGCGCGCCTTATTAACCCTAAAATCTTCAAACGTCTCAGATACAATGATTGTCTCGTCAATGATGGAAAGCCCTTAGCCAATGGCCATACTATTTCCTTTAAATATGCCAATACCTACCCTTATGCACTCTCTGTTTCCTCTGCCGCCTGCGCTTAG 519 0.4528 MEMRSTKTSSLFFFGMLAFVAALSGGAATKVYSSQQETKDTLSTMHHTHSHLGSAIETYPIPSTRNGRAQKRCRKGDIEIQQGPTEPLPNGIPTYTVEITNICVNGCSVSNIHIACGKFSSARLINPKIFKRLRYNDCLVNDGKPLANGHTISFKYANTYPYALSVSSAACA. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06417 172 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 33 171 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06417 Seca-Chr12 156184804 156186209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06417 73 166 Glycosyltransferase AT4G32110 31.579 3.33e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06417 - - pvy:116135766 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06417 12 156184804 156186209 Seca12g06417 12 156184804 156186209 ECH