Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06415 ATGGCTCCGATATCGGGCCCTTCAGGTACTCCTCCGCCGCCACTGTCGATATGCTTAAGCAAAGGATTGTCTCTGATTGGCCCAAAGGGTAAAACAGTCATGCCAAAGTCAGCAAATGAAGTGAAATTGATTAGTTCTGGTAAAATATTGGAAAACAACAAGACTGTCGGTCAGTGTAAAGTACCATTTGGTGATATTGCCGGGGGAGTTATAATCATGCATGTTGTTGTACAGCCATCTCTAGCAAAATCTAAAGCTGAAAAGAAGATTGATGATTCACCCAAGAAGGTTGTCTGTTCTTGTTCCATATTGTGA 315 0.4222 MAPISGPSGTPPPPLSICLSKGLSLIGPKGKTVMPKSANEVKLISSGKILENNKTVGQCKVPFGDIAGGVIIMHVVVQPSLAKSKAEKKIDDSPKKVVCSCSIL. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06415 104 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 28 103 IPR040015 -
Seca12g06415 104 Pfam Ubiquitin-2 like Rad60 SUMO-like 28 102 IPR039540 -
Seca12g06415 104 Gene3D - 25 86 - -
Seca12g06415 104 SUPERFAMILY Ubiquitin-like 28 83 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06415 Seca-Chr12 156174906 156180782 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06415 - - gmx:100810070 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06415 12 156174906 156180782 Seca12g06415 12 156174906 156180782 ECH