Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06412 ATGCAGCCACCGCCACCGCCACCGCTCGCGAATCCAGATTCAGACGCCACCGGTGCTCCTTCGTTAATCAGAACTTACCGCGCCTGGCAAGGCAATAACGTATTTTTTCTCAAAGGGAGGGTTATATTTGGACCTGATGTGAAGTCTATATTTATATCGATTTTCCTCATTATTGTCCCTGTTGCAATTTTCTGTGCTTTTGTAGCGAGGAAACTGCTAGATGATTTTCCCCATCACTGGGGATGGTCAATAATGGTCATAATTATTGCTCACACACTGTTTGTTCTGATCACCCTTCTACTGACTTCAGGAAGAGATCCAGGCATAGTACCTCGTAATGCTTATCCTCCTGAGCCAGATGACTACGATACGACAGCCAGTACCAACAGTGGACAAAGTCCACGGCCACGTTTGCCACGTACAAAGGATGTAATTGTCAATGGTATAACTGTGAAAATCAAATATTGCGATACCTGCATGCTCTATAGACCCCTCCGTTGTTCTCATTGTTCAGTATGTGATAACTGCGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGATTGCGAAATTACCGGTTCTACTACATATTTGTCTCCTCTGCAACTCTTCTCTGCTTATATGTACATGGCTTTTGCTGGGTCTACATTAAGAAGATCATGGACTCCGAGGAAATATCACTTTGGAAAGGAATGATCAAAACTCCAGCATCTGTTGTACTAATAATCTACACTTTCGTTTGTGTATGGTTTGTTGGCGGCCTCACAACTTTCCACACGTATCTCATTAGCACTAACCAGTCTACTTACGAAAATTTTAGATACCGGTATGACCGACAAGTCAACCCCTATAACAGAGGGATACTTGAGAACTTCAAAGAAGTATTCTGCACTAGCATTCCTCCATCTAAAAACAATTTCAGGTCCAAGATTCCAAAGGAGCCATCAGATACAAATCAAAGAGGGGGTGTTCGGTCCGTGAGCCCTATGCTGAAAAAACCCACCGGGAACATGGAATTAGTAGGGAGGCCAGTTTACTATGAGTCTGACGAGGAGGAAAGTGATTATGGAGATGAGTTAACCAATGAGGAACATAGCAAGGATGGTGGATCGACTGATATGTCCAGGGATTTAAGCAGGACCCTACACACAGAAGATAGTTCATATCTTAGGCATTCTCAGTGGGGAAGAATCAGCAGAAAGTGGGATATAACTCCTGAAGTTCTGGACACCGTACCTGAAGTTGGGGAATCCAATCGGACTGCCAGTGACACTAGTAGTGGGCCTACTGGGAACTCAACTAAAGCGGCTGTATAG 1329 0.4447 MQPPPPPPLANPDSDATGAPSLIRTYRAWQGNNVFFLKGRVIFGPDVKSIFISIFLIIVPVAIFCAFVARKLLDDFPHHWGWSIMVIIIAHTLFVLITLLLTSGRDPGIVPRNAYPPEPDDYDTTASTNSGQSPRPRLPRTKDVIVNGITVKIKYCDTCMLYRPLRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYIFVSSATLLCLYVHGFCWVYIKKIMDSEEISLWKGMIKTPASVVLIIYTFVCVWFVGGLTTFHTYLISTNQSTYENFRYRYDRQVNPYNRGILENFKEVFCTSIPPSKNNFRSKIPKEPSDTNQRGGVRSVSPMLKKPTGNMELVGRPVYYESDEEESDYGDELTNEEHSKDGGSTDMSRDLSRTLHTEDSSYLRHSQWGRISRKWDITPEVLDTVPEVGESNRTASDTSSGPTGNSTKAAV. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06412 442 MobiDBLite consensus disorder prediction 122 136 - -
Seca12g06412 442 MobiDBLite consensus disorder prediction 364 391 - -
Seca12g06412 442 Pfam DHHC palmitoyltransferase 153 278 IPR001594 GO:0016409
Seca12g06412 442 MobiDBLite consensus disorder prediction 420 442 - -
Seca12g06412 442 MobiDBLite consensus disorder prediction 115 138 - -
Seca12g06412 442 ProSiteProfiles DHHC domain profile. 154 204 - -
Seca12g06412 442 MobiDBLite consensus disorder prediction 310 442 - -
Seca12g06412 442 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 56 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06412 Seca-Chr12 156125228 156130513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06412 86 316 Lipid Metabolism Gene Families AT4G22750 28.287 7.45e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06412 - - gmx:100788304 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06412 12 156125228 156130513 Seca12g06412 12 156125228 156130513 ECH