Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06389 ATGAAGGGAAGTTTATTGTTTGAGCAAGATCAGAGCTGGGACGTGGCTTTAATGCACTTCAAAAGTGCTAGGGCTGTGTATGAGGAGTTAGGGAAATATGGAGATCTGGATAACCAAGTTTTGTGTCGTGAGCGAGTCGAGGAACTAGAACCTAGTATCAGATATTGCCTTCACAAAATTGGCCAGTCAAATCTACAAGCCTCTGAACTATTACACATTGGTGATATGGAAGGTCCTGCATTAGACCTTTTTAAAGCAAAATTAGAGGTTGTAATGGCTGAGGCAAGATCTCAACAAGCTGCTTCTATGACTGAATTCCAATGGCTTGGCCATAGATTTCCAATATCAAATGCCAAAACAAGGGTTGCCATTTTGAAAGCTCAGGAACTGGAGAAAGATATACACAGTCCCTTGGCAGACTCTATTCCAGCTGACAAAAGACTTGTTATTTTTGACAAAATCTTTTCCGCGTATCATGAAGCTAGAGGCTTTATTCGGGCTGATTTGGCCGCTACAGGCAGTGCAGAGAGCGTGAAAGATGATTTGAATGGCCTTGATAAGGCTGTCAGTGCTGTATTAGGAGAAAGAACCATTGAGCGGAATCTCTTGTTGGTTAAGGTTGCAAAAAGTAAACTTGCAAAGCGTAATGATGATAAAAATGAAAAAGTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACAGCTGATCTATCCGATTTAGTCAGTTCTGGAAGGGATCAAAAGCCAGAGGAAATTAGCTTTGCTGAAGAGTGCTCGTGCAAAAGTTTGGCTTTTCGAGCAGAAAGGTGCTTTTATGTGGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATACTCTGTACTGTCGTGCTCGCAATTTGGCAGAAGATGCCTTAAGGAAGCTTCAAATGTTAGATGGTAATAATAAGACTATGATGAAAGAGTTGGAGGTCCTTTGCAATGAATGCCGATCTAACAGTTGTATAGAGCATGCATTGGGGATCATGGAGGAGAAAAAGACTCAAGAGAATATCTCTGAAAGGATCTCCAATATATCATTGACTGGAGCTGAGCGGTTGGAGAAGTATCTTCTTGAGAAACTCGATGTTTATGAGTCTGCTGTGGGTGATTCAAATGTGAAATGTGCGCCCCGCATTGCAGCCTTCCCTCCACCTTTCCAGGCAATTTCCCGTAATCCTATTGTGCTGGACCTGGCTTATAACATGATCGAATTCCCATCTATTGAAAATAGGATGAAGAAGGATAGAAAAGCAAAGGGCGGCTTTATGAGCAGAATATTTGGATGA 1332 0.4197 MKGSLLFEQDQSWDVALMHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLHIGDMEGPALDLFKAKLEVVMAEARSQQAASMTEFQWLGHRFPISNAKTRVAILKAQELEKDIHSPLADSIPADKRLVIFDKIFSAYHEARGFIRADLAATGSAESVKDDLNGLDKAVSAVLGERTIERNLLLVKVAKSKLAKRNDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDQKPEEISFAEECSCKSLAFRAERCFYVAKSYSVAGKRAEAYTLYCRARNLAEDALRKLQMLDGNNKTMMKELEVLCNECRSNSCIEHALGIMEEKKTQENISERISNISLTGAERLEKYLLEKLDVYESAVGDSNVKCAPRIAAFPPPFQAISRNPIVLDLAYNMIEFPSIENRMKKDRKAKGGFMSRIFG. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06389 443 Pfam RNA-binding signal recognition particle 68 1 418 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Seca12g06389 443 Gene3D - 1 62 IPR038253 GO:0003723
Seca12g06389 443 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 1 442 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06389 Seca-Chr12 155887462 155894272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06389 K03107 - gmx:100816486 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06389 12 155887462 155894272 Seca12g06389 12 155887462 155894272 ECH