Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06387 ATGGCGTTCTCAGCGTCCTTGTGGTCTTCCCACTTTCTTCCAAATCCTAACAGAACCAACCGTTTCCCTAGATTCTCTCCCTCTCCCGCCAATCACAAACCACTCTCAACCACATTTGCCATCCCGCCGCTCTCAACCGCAACCGCCGCCGACGTTTCCGGCGCAATCGACGGGACCACCATCGCAGTGGTCAGCGGGGGCTTCGTGGCCGGCCTGGCCGCGTTGCTCTCCCTGACGGACCCGGAGAGGCGGCGGCGTGTCCAGGCGGAGGAGGTGGGCGGGGACGACAAAGAAGTGGTGAAAGAGTACTTCAACAACTCCGGGTTCCAGCGCTGGAAGAAGATCTACGGCGAAACCGACGACGTCAACAGGGTTCAGCGAGACATCAGGGTGGGCCACGCCAAAACCGTCGAGAACACCCTCCTCATGTTGAAAGACGAAGGCTCACTTCAGGGCGTCACCGTCTGTGACGCCGGCTGCGGCACCGGTTCTCTTTCTATTCCCCTCGCCAAAGAAGGCGCCATTGTAATCGCCAGTGATATCTCCGCTGCCATGGTCGCTGAAGCTGAGAAACAGGCTAAAGAACAACTTGTGGCTAGTGAAGATGGCGCTTCACCTGCGCCTGTCTTGCCCAAGTTTGTGGTGAAGGATTTGGAGAGTTTGGATGGCAAATATGACACAGTGGTGTGCCTTGATGTTTTGATTCATTATCCTCAGAATAAAGCGGATGGGATGATTGCACACCTTGCATCGTTGGCGGAAAACAGATTGATTCTGAGCTTTGCTCCTAAGACATTTTATTATGCTCTGTTGAAGAGGGTTGGAGAGTTGTTCCCTGGGCCTTCAAAGGCAACGAGGGCATATCTTCACTCAGAGGCAGATGTAGAGAGGGCATTGCGCAAGGTTGGCTGGAAGATAAGGAAGAGAGGCTCTATCACTACTCAATTTTACTTTGCCAATCTTATTGAGGCTGTTCCTGTGTAG 984 0.5386 MAFSASLWSSHFLPNPNRTNRFPRFSPSPANHKPLSTTFAIPPLSTATAADVSGAIDGTTIAVVSGGFVAGLAALLSLTDPERRRRVQAEEVGGDDKEVVKEYFNNSGFQRWKKIYGETDDVNRVQRDIRVGHAKTVENTLLMLKDEGSLQGVTVCDAGCGTGSLSIPLAKEGAIVIASDISAAMVAEAEKQAKEQLVASEDGASPAPVLPKFVVKDLESLDGKYDTVVCLDVLIHYPQNKADGMIAHLASLAENRLILSFAPKTFYYALLKRVGELFPGPSKATRAYLHSEADVERALRKVGWKIRKRGSITTQFYFANLIEAVPV. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06387 327 CDD AdoMet_MTases 154 261 - -
Seca12g06387 327 Gene3D Vaccinia Virus protein VP39 91 326 IPR029063 -
Seca12g06387 327 PANTHER METHYLTRANSFERASE 133 249 - -
Seca12g06387 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 92 310 IPR029063 -
Seca12g06387 327 NCBIfam magnesium protoporphyrin IX methyltransferase 96 323 IPR010251 GO:0015995|GO:0046406
Seca12g06387 327 ProSiteProfiles Magnesium protoporphyrin IX methyltransferase (EC 2.1.1.11) family profile. 1 326 IPR010251 GO:0015995|GO:0046406
Seca12g06387 327 Pfam Magnesium-protoporphyrin IX methyltransferase C-terminus 230 325 IPR010940 GO:0015995|GO:0046406
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06387 Seca-Chr12 155872260 155874283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06387 K03428 - gmx:100817017 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06387 12 155872260 155874283 Seca12g06387 12 155872260 155874283 ECH