Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06376 ATGGCCTCTTCTGCGACAAAAGCCAATTTTGGTTTGTCGGTGTTCCTCTTCTTCACCTCCACACTCGCATTAACAACAGCGGATCCAATTCCAACTCCACTTCCATGGCCCCATCAATTCCACTCAGTGCTGTTCATCAACAGAAGCGGTTCTCTCCAGAAAACCGACTTATGGTACGATTGGCCTAATGGCCGCAACTTCAACATCATCCAGCATCAGCTCGGCGTTCTCAAATACGACCTCGAATGGAACAATGGCACCTCCTTTTACTACACTCTCGACCCTTTCAACCATACCTGCAAAATCATCCATTTTGATGTTGGCATTCTCCGCCCCAACTGGCTCGACGGTGCTAACTATTTGGGTCAAGAATATGCTGACAATTTCCTCTGCAACGTTTGGGAGAAAGTTGACTTCATTTGGTACTACGAGGATGTCATCACTGGAAGACCTGTTAAGTGGATCTTCTCCTCCGGGATGACTGCTCATGTGATGACATTTGAGGTTGGTGCAGTGCTTGAGGATGCTCAATGGCAGGCTCCTGTGTACTGTTTTGGTGAGGTTGAGACACAGAAGAAAACTAGTACTAGTAACCCCCTATTATTAGACTTAGAACCTGCTGTTCTTGGTGGTTTTCCTGGGATGTTAATGAGAGAGATAGCACACCATGCATATGCTAAGTAA 684 0.4635 MASSATKANFGLSVFLFFTSTLALTTADPIPTPLPWPHQFHSVLFINRSGSLQKTDLWYDWPNGRNFNIIQHQLGVLKYDLEWNNGTSFYYTLDPFNHTCKIIHFDVGILRPNWLDGANYLGQEYADNFLCNVWEKVDFIWYYEDVITGRPVKWIFSSGMTAHVMTFEVGAVLEDAQWQAPVYCFGEVETQKKTSTSNPLLLDLEPAVLGGFPGMLMREIAHHAYAK. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06376 227 PANTHER EXPRESSED PROTEIN 14 197 IPR038941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06376 Seca-Chr12 155743208 155744219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06376 12 200 Glycosyltransferase AT4G14100 62.434 7.50e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06376 - - vra:106767055 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06376 12 155743208 155744219 Seca12g06376 12 155743208 155744219 ECH