Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06340 ATGGGGGGTCTCTGTTCCACGTCTGCCAAAGGTGACAAGGCTTTTGCCAAGACCAAAGGACATTCTGATGACCACAAATCTGCTGGTAAGAACCACAAACCCACTATTGATTTGTCAGCTGCAGGAGAGGGATTGGAGAAGAAAAAGAGGGAACCTGCTGCTGATGAAGGGACTGGTCCGGATGATTTCTATGATGGAATCCCACGCTATACTGATTCTTTTCCCCATAAGTCTAGGTCAGTAAGATCAAGGCAGGCTGCTGTGGCAAAGGTCTCAGAGGTGAGTTTACGCCTGGGCAGAGCTGGTACTTATGGAATTGGGAAGGCAGTTGATGTTTTGGACACTCTTGGGAGTAGCATGACAAATTTTAATGCTGGCAGTGGGTTTGCATCTGGAGCTGCAACAAAGGGGAATGAAGTTGGTATTTTAGCATTTGAGGTTGCAAACACTATTGTCAAGGGTTTTAGTCTTATGGAATCTCTTTCAACAAAAAGTATTAAGCATTTAAAAGAAGAGGTGCTTACATTAGAGGGTGTGCAAGATTTAGTATCAAAGGATATGGATGAACTTCTAAAAATTGTTGCTGCAGACAAGAGGGATGAGTTGAAAGTCTTTTCTGATGAGGTGATTCGTTTTGGAAATCGTTCAAAGAATCCTCAGTGGCACAACTTGGACCGTTACTTTGAGAAAATTAGCAGAGAACTTAATTCTCAAAGACAATCAAAGGATGAGGCAGAATTATCAATGCAGCAACTGATGACGTTAGTTCAATTTACAGCTGAATTATACCACGAGTTACATGCTTTGGATAGATTTGCACAAGATTATCAGCACAAGCGAGAAGAGGAGGATAATTCAGGTGCAGCTCAAAGTGATACAATGTTGAATATATCACTTCATCATATAGGAGAGAGCCTTTCAATCTTGAAAGCAGAACTTAAAGGTCAAAAGAAGCAAGTTAAGCATTTGAAGAAAAAGTCACTCTGGTCCAGAAGTTTAGAGGAGGTTATGGAGAAGCTTGTAGACATAGTCCATTTTTTGCATTTGGAGATAAACAATGCCTTTGGCAGTGAAGATGGCCGTAAACCATTAATTCAAACCAGCAGCAATCGTCAAAGATTGGGTCCTGCAGGCCTTGCTTTACATTATGCAAATATAGTACTCCAAATTGATACTCTAGTTGCCAGATCCAGTTCTATGCCTGCAAATACAAGGGACACATTATATCAGAGCTTGCCTCCTAACATAAAATCAACTTTGCGTTCCAAATTATCAAGTTTTCATGTTGTAAAAGAGTTCACAGTAGCAGATATTAAACATGAGATGGAGAAAACATTGCATTGGCTGGTTCCAATTGCTTCAAACACAGCCAAAGCACATCATGGTTTTGGTTGGGTAGGGGAGTGGGCAAGCACTGGCTCTGAGCTAAATAAGAAGGCCTTGAAGACTGATGTAATGCGGATTGAAACATTTCACCATGCAGATAAAGACAAAGTAGAAAATTACATTCTTGAACTTCTCTTGTGGCTTCACCGCCTAGCCATGAAAAGTAAAGGTGGCAATGATGTTGGAGAAATGAGGTCTACCATTAAGTCCAATGTTGGGAATGCCCTGCAAACAACAAATCAACAATCTACAAATTCCCCACCGCCATTGCTAACAACTGATGAGCAGATCATGCTGCAAGATGTAAGCAATAAAATTCGTATCAGAGGGATCAGTAAAAGCTTGGACTTTGATACTGTGAAGACTAGTTTGACAGATAACAGCAGATTGACCAAGAGTAGCAGCTATTCATCAACAAGTAGAAGCAAGGAATTATCTTTTAATAGAATTTTGTCTAAGCTTCCTTTAATTGATTTTGGTATTGACAAAAAGAGAGCATTGGATGTGATTGACAGATTAGATGTGGCCAGATAA 1920 0.4031 MGGLCSTSAKGDKAFAKTKGHSDDHKSAGKNHKPTIDLSAAGEGLEKKKREPAADEGTGPDDFYDGIPRYTDSFPHKSRSVRSRQAAVAKVSEVSLRLGRAGTYGIGKAVDVLDTLGSSMTNFNAGSGFASGAATKGNEVGILAFEVANTIVKGFSLMESLSTKSIKHLKEEVLTLEGVQDLVSKDMDELLKIVAADKRDELKVFSDEVIRFGNRSKNPQWHNLDRYFEKISRELNSQRQSKDEAELSMQQLMTLVQFTAELYHELHALDRFAQDYQHKREEEDNSGAAQSDTMLNISLHHIGESLSILKAELKGQKKQVKHLKKKSLWSRSLEEVMEKLVDIVHFLHLEINNAFGSEDGRKPLIQTSSNRQRLGPAGLALHYANIVLQIDTLVARSSSMPANTRDTLYQSLPPNIKSTLRSKLSSFHVVKEFTVADIKHEMEKTLHWLVPIASNTAKAHHGFGWVGEWASTGSELNKKALKTDVMRIETFHHADKDKVENYILELLLWLHRLAMKSKGGNDVGEMRSTIKSNVGNALQTTNQQSTNSPPPLLTTDEQIMLQDVSNKIRIRGISKSLDFDTVKTSLTDNSRLTKSSSYSSTSRSKELSFNRILSKLPLIDFGIDKKRALDVIDRLDVAR. 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06340 639 MobiDBLite consensus disorder prediction 1 69 - -
Seca12g06340 639 Coils Coil 306 326 - -
Seca12g06340 639 Pfam Domain of unknown function (DUF3475) 142 198 IPR021864 GO:0045927
Seca12g06340 639 PANTHER OS01G0873900 PROTEIN 1 636 IPR045021 GO:0045927
Seca12g06340 639 MobiDBLite consensus disorder prediction 14 32 - -
Seca12g06340 639 MobiDBLite consensus disorder prediction 42 57 - -
Seca12g06340 639 Pfam Protein of unknown function (DUF668) 373 458 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06340 Seca-Chr12 155337655 155346607 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06340 - - gmx:100804075 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06340 12 155337655 155346607 Seca12g06340 12 155337655 155346607 ECH
Seca12g06340 12 155337655 155346607 Seca12g06340 12 155337655 155346607 PCT