Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06304 ATGGGAAATGTAGAGTCATCACATGATGATTCATTCCAACAACCCCCTTCTTATGTTGGGAGTTCGACGAATACTAATTATCAATATCATCAACCCTCTTCTCATGCTGGAAGTTCGGCGAATCCCAGTTATCAACATAAGCAGAAACCTACATATATAGCTGACAATTTCACTTCATTGGATCAGGTTGTTTCTGCTCTAACAGAAGCTGGGTTGGAATCTTCAAATTTAATACTCGGTATTGACTTCACCAAAAGCAATGAGTGGACAGGTAAGCACTCCTTTAACCGCAAAAGCCTTCATTCTATTGGAAACACTCCTAATCCATATGAGCAAGCAATTTCTATCATTGGCCGTACTCTCTCTTCATTTGATGAAGATAATCTGATACCATGTTTTGGGTTTGGTGATGCCTCTACACATGATCAGAATGTGTTCAGCTTTTATCCTGATCATCGCTGTTGTCATGGTTTTGAGGAAGCACTTGCACGCTACAGAGAGATTGTTCCACACTTAAAATTGTCAGGTCCAACATCATTTGCCCCTGTGATCGACGCAGCAATTGACATTGTGGAGAGAAGCAATGGTCAATATCACGTTCTTGTCATTATTGCTGATGGACAGGTTACTAGAAATTCAGATACATCACATGGAAAGCTTAGCCCCCAAGAACAAGCGACTATTAATTCTATGGTTGCTGCAAGTCACTATCCTCTCTCAATTATTTTGGTTGGAGTTGGAGATGGACCATGGAATGAAATGCAGCATTTTGATGATAACATTACTCAGCGTTCATTTGACAATTTTCAGTTTGTGAATTTCACAAAGATCATGTCTGAGAACAAAGATCCATCAAAGAAGGAAGCAGCATTTGCACTTGCTGCCCTTATGGAAATTCCAATTCAGTACCGCATAGCCCAAAATCTACAAGTTGCCAAAGAGTCAGTAAGTTATCCACATAAAAAGCCTCTCCCTCCACCTAAGGAAGTAATAGATCATGACAATGCAGTCCTAGCAGTTTCACACATGAGAACTTTTGAATCAGTTGAGCCAACAGCTCCAGCTGCAGCTGAATCAGTATGTTACTTACTCCCTTACCCCACCCTATTGTCTTTCTCTTCCTTTAGATTCATTTTAAGATCATATTATGGTTGGGATGCATGCCCTGTTTGCCTAACCAATCCTAAGGACATGGCTTTTGGATGTGGTCATACAGTAAGTCTGTTTAATGATCCTATTTTGTTTAATGCTTATGTTAATGTGCCTTAG 1269 0.4003 MGNVESSHDDSFQQPPSYVGSSTNTNYQYHQPSSHAGSSANPSYQHKQKPTYIADNFTSLDQVVSALTEAGLESSNLILGIDFTKSNEWTGKHSFNRKSLHSIGNTPNPYEQAISIIGRTLSSFDEDNLIPCFGFGDASTHDQNVFSFYPDHRCCHGFEEALARYREIVPHLKLSGPTSFAPVIDAAIDIVERSNGQYHVLVIIADGQVTRNSDTSHGKLSPQEQATINSMVAASHYPLSIILVGVGDGPWNEMQHFDDNITQRSFDNFQFVNFTKIMSENKDPSKKEAAFALAALMEIPIQYRIAQNLQVAKESVSYPHKKPLPPPKEVIDHDNAVLAVSHMRTFESVEPTAPAAAESVCYLLPYPTLLSFSSFRFILRSYYGWDACPVCLTNPKDMAFGCGHTVSLFNDPILFNAYVNVP. 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06304 422 Gene3D von Willebrand factor, type A domain 99 280 IPR036465 -
Seca12g06304 422 PANTHER COPINE FAMILY PROTEIN 1 10 405 - -
Seca12g06304 422 SMART VWA_4 74 277 IPR002035 -
Seca12g06304 422 Pfam Copine 99 310 IPR010734 -
Seca12g06304 422 SUPERFAMILY vWA-like 75 258 IPR036465 -
Seca12g06304 422 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06304 Seca-Chr12 154939819 154944531 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06304 K16280 - gmx:100791316 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06304 12 154939819 154944531 Seca12g06304 12 154939819 154944531 ECH