Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06290 ATGGTGGGTGCATGCAGAGCACCACCCATTTCTCATCTTCCTCCGCGGATTCAGAATTCTCAGAGCAAAACATCTCTCCCCATTTTCAGAGCTCAATTTCCAAACAGGCGCTTGTTCCTCTTCTCTCTGCCCCTCTCTGGTTTCCTTCTCCTTCCTGTTCCTACCTTTGGCGAAGGTGGCAGTGCCACTAGTAGTAACAAATTTCAACCTTGGTTTTCTTCATATGCTGCCACACTGTATGACCCAGTAACTCCTTCTGAAAAAGATGCCAGTGCTTTAATCTCACAGAGAGTGTCTCAAGGAGTCCAGTTATTGGAGAAAGGGAGGGAATTGCAGGCTCAGGGTGACTTTAGTGGCGCTCTTGATTACTTTTCTCAGGTGATTGAAAGCTACAAAGACTTGGCATTCTCAGAGTATGCAAGGGTAGGAAGAGCGCTGGCCCTTTATGAAGTTGGTGACAGAGAAGAAGCAATTGCAGAGATGGAAGACGTTTCAATATCTCTAAAAGGGTATCCTGAAGTACATGCAGCTCTTGCAGCAGCCTTATATGCAGATAAGCATGCCGCATTGCTTGCTGAAAACCAGTTTGCTATTGCAACTTTGCTTGATCCCCATTTCACAGACCTTTCATATGTTAGAGACACAAAGCACTGGCCTCCAAGTTTGATTAGTTCTCTGCAGCATTTCATCACCCTGTCTTAA 702 0.4558 MVGACRAPPISHLPPRIQNSQSKTSLPIFRAQFPNRRLFLFSLPLSGFLLLPVPTFGEGGSATSSNKFQPWFSSYAATLYDPVTPSEKDASALISQRVSQGVQLLEKGRELQAQGDFSGALDYFSQVIESYKDLAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHAALAAALYADKHAALLAENQFAIATLLDPHFTDLSYVRDTKHWPPSLISSLQHFITLS. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06290 233 Gene3D Tetratricopeptide repeat domain 97 218 IPR011990 GO:0005515
Seca12g06290 233 SUPERFAMILY TPR-like 93 208 IPR011990 GO:0005515
Seca12g06290 233 Pfam Tetratricopeptide repeat 113 180 - -
Seca12g06290 233 PANTHER EXPRESSED PROTEIN 14 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06290 Seca-Chr12 154787994 154791478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06290 - - gmx:100500132 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06290 12 154787994 154791478 Seca12g06290 12 154787994 154791478 ECH