Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06282 ATGGTGAGGTTTTTAGGGTTGACTCGTGGTTTTGCAGATGAACCCCGTGAAATTGTGTCAAGGTCAAACCTGACCAGCGAGTCTAGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCGGCGTTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGAGCATGCCGGGGTGCGCGATTATCTCTGTAATAGGATGTACACTCTTCCCTTGCAAGGGGTTGAGAGTTATTTGTTCCAAATATGTTACATGATGATACACAAGCCTAGTCCGTCATTGGATAAATTTGTGATAGATATTTGCTCAAAGTCGCTTAAGATTGCTTTGAAGGTACAATGGTTCTTGTTGGCGGAGCTTGAGGACTCTGAAGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGTCAGATTGCAGCCACCTTGATGGGTGAGTGGCCGCCTCTTATACAGCCTCAAACTGAACCTCCCAGTCCTGGAGGCAAGAGCCAAGTTTTGAATAGGCTGCTTTCATCAAAAAATCGATTGTTGGCACTAACAACCTCACCGCCTTCTCAGAAGTCTTTATCATTCTCACCTTCCCCGGGAAACAATTTGCAAGACGACGACAACCCCCTGTCTCCTGATGAGAACAATATATTTAAGAAGTTTATGCCAAGTCCAAAGGTTAGAGATGCTTTGTTTTTTAGGAAGTCAGTGGACAAAGATGATGATGATTCTGAAAAGGATGGGTTTTTCAAGAGGCTTTTAAGAGATAGCAAAAATGATGATGAGCTGGGTGCAAAAATTCGTGATGCATTTCTTTTTCGGAAGTCGTCTGATAAAGATGATGAAGACTCTGAAAAAGATAATTTCTTTAAAAGGTTATTAAGGGACAGTAGGGACAGTAGTAGAGGTAACGATGAAGACCCTGAAAAGGATGGTTTCTTTCGGAGGCTCTTAAAGGACAATAAAAGTGAAGATGAGGATGCGAGTTCAAGTTCAGAGGGATTTTTTAAGAGGTTGTTTCGTGATAGCAAGAATGATTCTGAGGACAGAACACACACTAAATCAATAGAAGATGAAGAGAAAGAGGGATTTTTCCGAAAGTTCTTACGGGAGAAATTTGAAGATAGGAAGGATGGGAGTGATAGGAATGATAACAGAGATGTTGCTAATTCTGAAGAGAAATGTGCAAAACCTGCTGAAGAAGATGAAAAAGAAGGGCTTTTCAGGAAATTGTTTAAGGATAAATTTGAGGACAAGAAAGGAACAAATGATAAATTTGGAGAGAGTACTGCCAATGGTGAGGATGAAGAGCCTTCTGAGTTTTCCTTGTTCAAAAGACTATTTCGTGTTCACCCTGAAGATGCTAAAAGTAGTTCGGCCAATGAAAACAGCAATAATGGTGGCTTATTTGAAAGTAGTCCAGGCACAGAGAATTTTTTCCGTAAATTGTTCAGAGATCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGGTCAAAGAGACAAAAAGAGAAGCATCCTGGATCCCCAAAACAACAAAGTGAAAAATTGAGCACCAAGCCCCCATTACCAAGTCCATCTCAGTTCCGGAAAGGTGCTTACCATGATTCATTGGAGTTTGTGCAATCATTATGTGAGACATCATATGGGTTAGTGGATGTATTTCCAATTGAAGATCGCAAAAGTGCTCTTCATGAGTCGCTTGCAGAGATCAATATCCATGTAACAGAGGTTCAAAACACTGGAGGAGTTTGTTTTCCATTGGGAAAGGGCATGTATCGCGTACTTCATATACCTGAAGAGGAAGCTGTTCTGTTGAATTCTAGGGAGAAGGCACCTTACCTGATTTGCGTCGAAGTTTTGAAATGTGAAATGCCTAGTAATTCCAGGGAGACATCAAGTTCTCAAAAACTTTCTCAAGGTGGAATTCCTTTGGCAAATGGAGATGCTCTCTTGCAAAAACCACCCCCTTGGGCTTATCCATTATGGACAGCACAAGAGGTGTACCGTAATAGCAATGATAGGATGTCCAGTTCCACTGCTCAAGCAATTGACCAGGCAATGACTCATGTATCTGAGGCAAAAAAAAAATTTGTTAGTATGAATCTTTTCGTAGAAACACAACTAAATGGTCAGCCAAAGAAGACTGCAGTGACTGATCTATGTGGTGGCAGTCAGCATCCTGTTTCAATTTATAGAGAGGGTGCACATGAAGCAGCAGGAACAGGACATGACAGTGATTTGGAATGGGTACGAGTGGTGTTGACAGCAGACCCTGGGGTTAGATTGGAAGATATTGAGGATCAAGCACCACATCGGAGGAAGGAACATCGCCGCGTTCCTAGTACAGTAGCAATAGAAGAAGTAAAGGCTGCAGCAGCAAAAGGGGAAGCACCTCTTGGACTCCCTTTAAAAGGTGCTGGTCAAGATTCATCAGATGCACAACCAAGGGCTAATGGAATTACTCCCAAAGCCAGTGATGCTTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGAAAGGGTACGCAAGGCTTCCATTTATGGGAAGTTACCTGGTTGGGACTTACGATCGGTTATTGTAAAGAGTGGTGATGATTGCAGGCAGGAACATCTAGCTGTTCAGCTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTCTACCCCTCTGGCTGCGCCCTTATGAAGTTTTATGTACTTCTTCTTATACAGCTCTCATTGAAACAATTCCAGATACGGCTTCTCTACATTCTATCAAAAGTAGATATCCCAACATCTCAAGTTTACGTGAATTCTTCAATGCTAAGTATCAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAGAGTATGGCAGGATATTCCCTGGTGTGCTACTTTCTACAGGTGAAGGATAGGCACAATGGGAACCTCCTATTGGATGAAGAAGGTCATGTCATACATATTGATTTTGGCTTCATGCTTTCCAATTCACCTGGTGGTGTTAACTTTGAAAGTGCACCTTTCAAATTAACACGTGAACTTCTTGAGGTTATGGATTCTGATGCCGAGGGTGTTCCAAGCGAGTTCTTTGATTATTTTAAGGTTTTATGCATTCAAGGTTTCCTTACTTGCCGCAAGCATGCTGAGCGAGTTATTCTTCTAGTTGAGATGTTGCAGGATTCAGGTTTCCCATGCTTTAAAGGTGGTGCACGGACTATTCAGAACTTACGAAAACGATTCCATCTCAGTTTAACAGAGGAGCAATGTGTCTCCTTGGTGCTTTCACTTATTAGTAGTAGCCTGGATGCTTGGAGGACACGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATATTGTGA 3348 0.4185 MVRFLGLTRGFADEPREIVSRSNLTSESSENGWLIRFFDSAFFCEWIAVSYLYKHEHAGVRDYLCNRMYTLPLQGVESYLFQICYMMIHKPSPSLDKFVIDICSKSLKIALKVQWFLLAELEDSEDNEGISRIQEKCQIAATLMGEWPPLIQPQTEPPSPGGKSQVLNRLLSSKNRLLALTTSPPSQKSLSFSPSPGNNLQDDDNPLSPDENNIFKKFMPSPKVRDALFFRKSVDKDDDDSEKDGFFKRLLRDSKNDDELGAKIRDAFLFRKSSDKDDEDSEKDNFFKRLLRDSRDSSRGNDEDPEKDGFFRRLLKDNKSEDEDASSSSEGFFKRLFRDSKNDSEDRTHTKSIEDEEKEGFFRKFLREKFEDRKDGSDRNDNRDVANSEEKCAKPAEEDEKEGLFRKLFKDKFEDKKGTNDKFGESTANGEDEEPSEFSLFKRLFRVHPEDAKSSSANENSNNGGLFESSPGTENFFRKLFRDRDRSIEDSELLGSKRQKEKHPGSPKQQSEKLSTKPPLPSPSQFRKGAYHDSLEFVQSLCETSYGLVDVFPIEDRKSALHESLAEINIHVTEVQNTGGVCFPLGKGMYRVLHIPEEEAVLLNSREKAPYLICVEVLKCEMPSNSRETSSSQKLSQGGIPLANGDALLQKPPPWAYPLWTAQEVYRNSNDRMSSSTAQAIDQAMTHVSEAKKKFVSMNLFVETQLNGQPKKTAVTDLCGGSQHPVSIYREGAHEAAGTGHDSDLEWVRVVLTADPGVRLEDIEDQAPHRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKERVRKASIYGKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFNAKYQENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHVIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERVILLVEMLQDSGFPCFKGGARTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL. 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06282 1115 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 1115 IPR015433 GO:0046854|GO:0048015
Seca12g06282 1115 MobiDBLite consensus disorder prediction 182 208 - -
Seca12g06282 1115 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 857 871 IPR018936 GO:0016301
Seca12g06282 1115 Gene3D - 912 1113 IPR036940 -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 294 313 - -
Seca12g06282 1115 SMART pi3k_hr1_6 854 1113 IPR000403 -
Seca12g06282 1115 SUPERFAMILY Protein kinase-like (PK-like) 563 1108 IPR011009 -
Seca12g06282 1115 FunFam Phosphatidylinositol 4-kinase beta 1 912 1113 - -
Seca12g06282 1115 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 182 217 - -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 488 508 - -
Seca12g06282 1115 FunFam phosphatidylinositol 4-kinase beta 1 748 907 - -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 451 471 - -
Seca12g06282 1115 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 797 822 - -
Seca12g06282 1115 Pfam Phosphatidylinositol 3- and 4-kinase 854 1061 IPR000403 -
Seca12g06282 1115 Gene3D - 749 907 - -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 373 401 - -
Seca12g06282 1115 CDD PI4Kc_III_beta 823 1115 - -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 454 470 - -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 488 526 - -
Seca12g06282 1115 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 832 1100 IPR000403 -
Seca12g06282 1115 MobiDBLite consensus disorder prediction 416 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06282 Seca-Chr12 154716330 154730689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06282 1 1114 Lipid Metabolism Gene Families AT5G09350 69.284 0.0 1545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06282 K19801 - gmx:100778394 1923.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06282 12 154716330 154730689 Seca12g06282 12 154716330 154730689 ECH