Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06280 ATGTTGCGTTACATAAACAACATCATACATCAGTTCTTGCTGATGGAGGTAGAGATACCCATATTATCTGAGCCAAGTGATGAGGTTGGTGTTTTGTCCAAAACAAGCACCACATCAGAAACAACATCTCATGACTTTTGTTACCACCCTGAGTCCTTCAAGAAACTAGTTGAAATGGACCTTCCCTGTAATGAATCTGTGGAGGAAAAACTGTCTTGGTTAAGGTCCCAGATCATAGGGAATGATGCAGAGTTTGACTCTCCATTTGGAAGAAGAAGACTTCTCTATGCTGATCACACTGCTTCAGGCCGCAGCCTTCACTACAATGAAAATTTTATCATCAACCATCTCCTTCCTTTCTATGGTAATACTCACACTTGTGACAGTTACGTGGGAAGCAGGACAACAAAAATGTTACATGAAGCAACTGAGTATATTAAGAAATGCTTAGGTGGTGGTAAAAATGATGCAATCCTCTTCTGTGGCTCAGGCACAACTGCAGCTATCAAGAGGCTACAAGAAGTAATGGGAATTGCTGTGCCCTCTATTATGAGGGAAAGGCTTTTAAAGAGTCTTAGCAATGAAGAGAGATGGGTGGTTTTTGTTGGACCTCATGAGCACCATTCCAACCTTCTTTCTTGGAGGCAGAGTTTGGCTGAGGTTGTAGAAATTGGCCTTGATGATCAAGGGTTATTGGACATGGATGCTCTAAAGCAACAACTTGAAGCCTTTAAACATACCAACCGACCCTTATTGGGATCTTTCTCTGCTTGTAGCAATGTCACAGGAATTTATTCAGATACAAGAGCAATTGCTAGGCTTCTTCATCAGTACAAAGGTTTTGCATGCTTTGATTTTGCAGCAAGTGGTCCATATGTGGAGATTGACATGAGGTCAGGGAAGATTGATGGCTATGATGCTGTGTTCCTCGGTCCACATAAGTTTCTTGGTGGTCCTGACTCTCCGGGAGTGCTCCTAATGAGCAAGGCCTTGTACCAGCTGAGATCTTCACCCCCATCAACTTGTGGAGGTGGAACTGTCACTTATGTCAATGGCTTCAATGAAAAGGATACATTATACTTGGAGGACATAGAGGAGAGGGAAATGGGGGGCACGCCTCCAATAATCCAGACAGTCAGAGCAGCGTTGGCATTTTGGGTGAAAGAGTACATCAGCTATGAAGAGATTGAAAAAAGGGAGCATATGTACATTAACAAGGCACTCCAGAGGCTTGTCTCTAACCCCAACATTGAGGTTCTGGGAAACACAAAAGCCAAGAGACATGCAATATTGTCATTTCTCATCTACTCTACCACCAATTCTTCCTCAGCTGGTTGTGGAAATGAGTGTGATGGTACTAACCAAGAAGGGGAACTTAATTTGTGGCAAGAAACTGGGAACCAAAGAGGTAAACCACTTCATGGCCCTTTTGTTGCAGCACTGTTGAATGACCTCTTTGGCATCCAAGCTCGAGGTGGGTGTGCTTGTGCTGGACCTTATGGCCATGAATTGCTCCACATCAACAAAACTCAATCACTTGCTATTAGATCAGCAGTTCAAGAGGGCTATATTGGAGTGAAACCTGGATGGACCCGAGTTAGTTTCCCTTATTACATGAGTGAGGAAGATTTTGAGTACATTATGAGTGCTATAGAGTTTGTAGCTTTATATGGCCAACGGTTCTTTCCTCTGTATAGCTTCAATTTGAGAAATGGCAGCTGGAGAATGAAGACAGAAAAATTTGAGGCATTAGCTAAGGAAGGCAATTGCAACCTTCCTAATAATTTGTTGGGAAGAAAAACTCTAGAGGAATTAAACACTGATCATAATAATAATATTGGAGTTAAACAAGGTGGGGTGGTGAGAGGGAAAGAATCATACTTTGATGCGGCTAAATATATTGCTAGTAATCTCCCTAAGTTCCCTCCTCAGGGTATACTCCAGGGAGATGTGGATCCCAATATCCTCTGCTTTAGAGTTTGA 1983 0.4256 MLRYINNIIHQFLLMEVEIPILSEPSDEVGVLSKTSTTSETTSHDFCYHPESFKKLVEMDLPCNESVEEKLSWLRSQIIGNDAEFDSPFGRRRLLYADHTASGRSLHYNENFIINHLLPFYGNTHTCDSYVGSRTTKMLHEATEYIKKCLGGGKNDAILFCGSGTTAAIKRLQEVMGIAVPSIMRERLLKSLSNEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDQGLLDMDALKQQLEAFKHTNRPLLGSFSACSNVTGIYSDTRAIARLLHQYKGFACFDFAASGPYVEIDMRSGKIDGYDAVFLGPHKFLGGPDSPGVLLMSKALYQLRSSPPSTCGGGTVTYVNGFNEKDTLYLEDIEEREMGGTPPIIQTVRAALAFWVKEYISYEEIEKREHMYINKALQRLVSNPNIEVLGNTKAKRHAILSFLIYSTTNSSSAGCGNECDGTNQEGELNLWQETGNQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHELLHINKTQSLAIRSAVQEGYIGVKPGWTRVSFPYYMSEEDFEYIMSAIEFVALYGQRFFPLYSFNLRNGSWRMKTEKFEALAKEGNCNLPNNLLGRKTLEELNTDHNNNIGVKQGGVVRGKESYFDAAKYIASNLPKFPPQGILQGDVDPNILCFRV. 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06280 660 Gene3D - 113 347 IPR015421 GO:0003824
Seca12g06280 660 Pfam Aminotransferase class-V 117 436 IPR000192 -
Seca12g06280 660 SUPERFAMILY PLP-dependent transferases 88 552 IPR015424 -
Seca12g06280 660 PANTHER CYSTEINE DESULFURASE 58 560 - -
Seca12g06280 660 Gene3D Aspartate Aminotransferase, domain 1 370 558 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06280 Seca-Chr12 154698006 154701191 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06280 - - lja:Lj4g3v2742940.1 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06280 12 154698006 154701191 Seca12g06280 12 154698006 154701191 ECH