Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06279 ATGAACCATAACTATATATATACCACAAAAACTAACCACTATTCATATCAAATATCAAATATCAAATATAAACACCCACTACTTTTTCCTTTCTTATACTTAAAGCTACCCTTTGATCTTGATTACTACTACTCACTCATGTCGACCAAGTTAGAGAAACACATATTAAATGAGCTATTATACTTAGCTGATCAAAGCCAGAGCAAGGCCAAAAAGGTGGATGTTTCATCCAAAACTACAAGCATAGCTGAAACATCTCGTGATTTTTGTAACAACTCTGAGTCCTTTAAGTTCTTAGTGGAGAAGGACCTGCCATGTATTAGTAATGAATTATCTGTGGAACAAAAACTATGTTGGTTGCGTTCACAGATCATAGGTAATGATGCAGAGTTTGAGTCTCCATTTGGAAGAAGAAAACTTGTCTATGCTGATCACACTGCTTCAGGTCGCAGCCTTCACTACAATGAAAACTTCATCATCAATCATGTTCTGCCTTTCTACGGTAATACTCACACATGTGACAGTTACGTTGGAAGCAGGACAACAAAAATGTTACATGAAGCAAGTGAGTACATTAAGAAATGCTTAGGTGGTGGAGAAAATGATGCACTAATATTCTGTGGCTCAGGCACAACTGCAGCCATCAAGAGGCTACAAGAAGTGATGGGAATTGCTGTGCCCTCTATTATGAGGGAAAGGCTTTTAAAGAGTCTAAGCAATGAAGAGAGATGGGTGGTTTTTATTGGACCTCATGAGCACCATTCCAATCTCCTTTCTTGGAGGCAGAGTTTGGCTGAAGTTGTAGAAATTGGACTTGATGACAAAGGGTTGTTAGACATGGATGCTCTAAAGCAACAACTTGAAGTCTATAAACACACCAATCGACCCCTATTGGGATCTTTCTCTGCCTGTAGCAATGTCACAGGAATTTATTCAGATACAAGAGCAATTGCTAGGCTTCTTCATGAGTACAAAGGGTTTGCATGCTTTGATTTTGCAGCAAGTGGTCCATATGTGGAGATTGATATGAGGTCAGGACAGAGGGATGGGTATGATGGTGTGTTCCTGAGTCCACATAAGTTTGTTGGAGGTCCTGACTCTCCGGGAGTGCTGTTGATGAGCAAGGGACTGTACCAATTAAGATCTTCACCACCATCTACATGTGGAGGTGGAACTGTCAATTACGTCAATGGCTTCAATGAAAAGGATACATTGTACGTGGAGAACATAGAGGAAAGGGAAAATGGAGGCACACCTCCAATAATCCAAACAGTGAGAGCGGCATTGGCATTTTGGGTGAAAGAGTACATCACCTACCAAGAAATTGAAAAACGGGAACAACTGTACATTAACAAGGCACTTAAGAGACTCACCTCAAACCCAAACATTGAGATATTGGGAAACTTAAGCACCAAAAGACAAGCTATATTGTCATTTGTTATTTATTCTACCACCAATTCTTCATCACCTGGTTTGGGCAATAAATGTCAAGATGAAGATATTGATAGCAAGAAACAGGACAATGAAAGAGAACTTAATTTATGGGCAGAGACAGGGAGCAAAAGAGGTAAGCTACTTCATGGCCCTTTTGTTGCTACATTGCTAAATGATCTCTTTGGAATCCAAGCTCGAGGTGGTTGTGCTTGTGCTGGACCTTATGGCCATGAATTGCTCAACATCAACAAATCTCAATCACTTGCTGTTAGATCAGCTATTCAAGAGGGTTATGTTGGAGTAAAGCCTGGATGGAGCAGAGTTAGTTTTCCTTATTACATGGAGGAGGAGGAATTTGAGTTCATCTTAAGTGCTATAGAGTTTGTAGCTATGTATGGCCAAAGATTTCTTCCATTGTATAGCTTCAATTTGAGAAATGGTAGCTGGAGAATAAAGACAGAGGAAGTTGAGGCTCTAACCAAGGGAATTAAGAGTTGCAACTTTATAAAAACAGCAGCTCCAGAGGAAACAAATAAAGCAGAGAGTGAATATGATATTATAATGAAACAAGTTATATCTATTGCTAGTTGCCTCCCCAAGTTCCCTTCTCAAACTATACTCCAAGAAGATGCTAATCCTAGCATCTTCCATTTTATAGTCTATTAA 2100 0.3948 MNHNYIYTTKTNHYSYQISNIKYKHPLLFPFLYLKLPFDLDYYYSLMSTKLEKHILNELLYLADQSQSKAKKVDVSSKTTSIAETSRDFCNNSESFKFLVEKDLPCISNELSVEQKLCWLRSQIIGNDAEFESPFGRRKLVYADHTASGRSLHYNENFIINHVLPFYGNTHTCDSYVGSRTTKMLHEASEYIKKCLGGGENDALIFCGSGTTAAIKRLQEVMGIAVPSIMRERLLKSLSNEERWVVFIGPHEHHSNLLSWRQSLAEVVEIGLDDKGLLDMDALKQQLEVYKHTNRPLLGSFSACSNVTGIYSDTRAIARLLHEYKGFACFDFAASGPYVEIDMRSGQRDGYDGVFLSPHKFVGGPDSPGVLLMSKGLYQLRSSPPSTCGGGTVNYVNGFNEKDTLYVENIEERENGGTPPIIQTVRAALAFWVKEYITYQEIEKREQLYINKALKRLTSNPNIEILGNLSTKRQAILSFVIYSTTNSSSPGLGNKCQDEDIDSKKQDNERELNLWAETGSKRGKLLHGPFVATLLNDLFGIQARGGCACAGPYGHELLNINKSQSLAVRSAIQEGYVGVKPGWSRVSFPYYMEEEEFEFILSAIEFVAMYGQRFLPLYSFNLRNGSWRIKTEEVEALTKGIKSCNFIKTAAPEETNKAESEYDIIMKQVISIASCLPKFPSQTILQEDANPSIFHFIVY. 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06279 699 Gene3D - 159 395 IPR015421 GO:0003824
Seca12g06279 699 SUPERFAMILY PLP-dependent transferases 134 605 IPR015424 -
Seca12g06279 699 PANTHER CYSTEINE DESULFURASE 111 613 - -
Seca12g06279 699 Pfam Aminotransferase class-V 165 482 IPR000192 -
Seca12g06279 699 Gene3D Aspartate Aminotransferase, domain 1 412 612 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06279 Seca-Chr12 154681511 154686579 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06279 - - gmx:100776921 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06279 12 154681511 154686579 Seca12g06279 12 154681511 154686579 ECH