Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06266 ATGGCAATCTCCACCACCTCCCCTCTCTTCTCTTTCTCTTCTTTGTCTTTCCATTCTCCTTCTCCTTCAAAACCTCACTGTGTCCTTTCTTCTTCCACTTGCTGGACACGTTCTACTTCTCCAAGAAATTCAACCTCCTACTCCATTCGCTCCTCTTATTCCGAAAGGGCTTCTTCCCCTGACCCTATCAATTTCAGGAAGTCTGAAATTCCATCCATGTCTCCCTTTGGACTCTCAATGAACGAATCCAACAGACCATCATTCAAATGGAGAAGAGTTTTGCTCAAAGTCAGCGGAGAAGCACTTGCAGGAGACCACTCTCAGAATATTGACCCCAAGATAACCATGGCCATTGCAAGGGAGGTGGCAGCTGTCACTCGCCTTGGTATTGAGGTTGCACTAGTAGTTGGTGGGGGTAACATTTTCCGTGGATCGTCCTGGGCTGGAAGTAGCGGTTTAGACCGCTCATCTGCTGATTATATTGGGATGTTGGCAACTGTCATGAATGCTATATTTCTTCAAGCGACAATGGAGAGTATTGGCATTCCAACTCGGGTGCAGACTGCATTTCGCATGTCTGAGGTTGCAGAACCATATATACGCAGAAGGGCTGTGAGGCATTTGGAAAAAGGAAGGGTTGTCATTTTTGCTGCTGGAACTGGAAATCCATTCTTTACCACAGACACTGCTGCAGCACTCCGATGTGCTGAAATTAATGCAGAGGTTGTACTCAAAGCAACAAATGTTGATGGAGTGTATGAGGATGACCCAAGGCGTAATCCACAAGCACGTCTTCTTGACACTGTAACCTATCAGGAGGTAACTTCAAAAGATCTGTCAGTGATGGACATGACTGCCATAACATTATGCCAGGAAAATAATATTCCTGTTGTTGTCTTCAACCTAAACAAACCAGGTAACATTGAGAAAGCCATTAAAGGCGAGAGAGTTGGCACCTTGATTGGGGCAACGTGGAATTCTACCATGTCAAGAACGTGA 999 0.4555 MAISTTSPLFSFSSLSFHSPSPSKPHCVLSSSTCWTRSTSPRNSTSYSIRSSYSERASSPDPINFRKSEIPSMSPFGLSMNESNRPSFKWRRVLLKVSGEALAGDHSQNIDPKITMAIAREVAAVTRLGIEVALVVGGGNIFRGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYEDDPRRNPQARLLDTVTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNKPGNIEKAIKGERVGTLIGATWNSTMSRT. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06266 332 CDD AAK_UMPK-PyrH-Ec 91 322 IPR015963 GO:0005737|GO:0006221|GO:0033862
Seca12g06266 332 Pfam Amino acid kinase family 92 301 IPR001048 -
Seca12g06266 332 Hamap Uridylate kinase [pyrH]. 88 322 IPR015963 GO:0005737|GO:0006221|GO:0033862
Seca12g06266 332 NCBIfam UMP kinase 91 321 IPR015963 GO:0005737|GO:0006221|GO:0033862
Seca12g06266 332 SUPERFAMILY Carbamate kinase-like 88 321 IPR036393 -
Seca12g06266 332 PANTHER URIDYLATE KINASE 46 325 - -
Seca12g06266 332 Gene3D - 81 328 IPR036393 -
Seca12g06266 332 FunFam Uridylate kinase 81 324 - -
Seca12g06266 332 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06266 Seca-Chr12 154528249 154531572 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06266 K09903 - gmx:100781745 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06266 12 154528249 154531572 Seca12g06266 12 154528249 154531572 ECH