Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06191 ATGAGGAGGAAAGGAACTAAGAGGAAGACGAAGCACGACGAAGAACCCAAACCAAATGTTGATGCAGAAGCTGAAGCAACATCATCCCAAGCAAACAAGAACCAACCTACCGAAGACAAAGCACCTAAACCTTCTCGAGCAAAGCGTGCCAAGACCTCCAAGCCTGAATCCGAACCTGAATACTTCGAAGATAAGCGCAACTTGGAAGACTTGTGGAGGGAAACATTCCCTGTTGGAACTGAGTGGGACCAATTGGATTCTGTCTATCAATTCAAGTGGGATTTCTCTAATTTAGAAAATGCATTTGAAGAGGGTGGCATCCTGTATGGGAAAAAGGTTTACCTCTTTGGTTGCACAGAGCCCCAACTAGTCAGCTTTAAAGGGGAAAGCAAAATTGTCTGCATACCTGTTGTAGTAGCTGTTGTATCACCATTTCCACCATCTGATAAAATTGGGATTAACTCAGTTCAGAGAGAGGCTGAAGAGATAATTCCCATGAAACAAATGAAAATGGACTGGGTTCCATATATTCCTCTGGAGGACAGAGATAGCCAAGTTGATAGACTAAAGTCTCAAATATTTATCTTGAGTTGCACCCAAAGAAGGTCTGCTTTAAAACACCTGAAGTTGGATAGATTAAAGAAATACGAGTACTGCTTGCCTTATTTCTATCAGCCCTTTAAGGAAGATGAACTTGAACAGAGCACTGAGGTTCAAATAATATATCCTGCTGAGCCAAAGCCGGTAATTATGATAAAGAAAACTTTTCCTAGTGAATTGATAATCTTTGGCTTGTTCGGGGTCTTCTGTGAATTTGATTGGGAATTAGATGAGCTTGAGGAGTTTACTGATAAGCTCATACAGGAGGAAGAGTTATCAGAAGATCAAAAGGATGCATTCAAGGAATTTGTCAAGGAAAAGGTTCGAGAAGCAAAGAAAGCCAATAGAGAGGCGAGGGAAGCTCGGAAAAAGGCCATTGAAGAAATGAGTGAGGAAACTAAAGCTGCATTTGATAATATGAGATTTTATAAGTTCTACCCTGTTCAATCTCCAGATGCTCCTGATGTATCAAATGTTAAGGTATGA 1086 0.407 MRRKGTKRKTKHDEEPKPNVDAEAEATSSQANKNQPTEDKAPKPSRAKRAKTSKPESEPEYFEDKRNLEDLWRETFPVGTEWDQLDSVYQFKWDFSNLENAFEEGGILYGKKVYLFGCTEPQLVSFKGESKIVCIPVVVAVVSPFPPSDKIGINSVQREAEEIIPMKQMKMDWVPYIPLEDRDSQVDRLKSQIFILSCTQRRSALKHLKLDRLKKYEYCLPYFYQPFKEDELEQSTEVQIIYPAEPKPVIMIKKTFPSELIIFGLFGVFCEFDWELDELEEFTDKLIQEEELSEDQKDAFKEFVKEKVREAKKANREAREARKKAIEEMSEETKAAFDNMRFYKFYPVQSPDAPDVSNVKV. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06191 361 Coils Coil 301 335 - -
Seca12g06191 361 MobiDBLite consensus disorder prediction 23 38 - -
Seca12g06191 361 MobiDBLite consensus disorder prediction 39 62 - -
Seca12g06191 361 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 48 360 IPR039313 GO:1900034
Seca12g06191 361 MobiDBLite consensus disorder prediction 1 62 - -
Seca12g06191 361 Gene3D - 8 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06191 Seca-Chr12 153783245 153787847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06191 - - ccaj:109799386 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06191 12 153783245 153787847 Seca12g06191 12 153783245 153787847 ECH
Seca12g06191 12 153783245 153787847 Seca4g02074 4 35264867 35270253 PCT