Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06097 ATGGAGAGTGGTGTGACAACAGTGGATTGCCACAAACAAGTTCGATCATGGAGGCTGCTACGTTCTTTCATGGAACTACTAATCCCAACTTGCAACTGTGCCACCACCATTATAGAAGAAGACCATGAAGAAGTAATATCAGACACGTGTCACAAAATTTCTTCCTCCAAGTGTGGTTCTTCACTGATCACAGGGACAATATTTGGATACCGAAGAGGAAAGGTGAGTTTTTGTATTCAAGCAAATGCAAACTCCACCAACCCAATTCTCCTCTTAGAACTAGCAGTTCCAACAAGCATTTTAGCTAAGGAAATGAGAGGAGGAACTCTTAGAATTTCGCTAGAGAGTAGTAGTGGAAACAACAACAATAGTAGTAGCCTTTTGTCTACACCTGTGTGGACTATGTATTGTAATGGGAGAAAAGTGGGGTATGCTGTTAAACGAAGGCCTTCGAATATGGATTATGAAGCACTGAGGTTGATGCGTTCGGTTGTGGTGGGAACTGGAGTGATGAAATGCAAGGAAGAAGAAGAAGATGATCAAGTTATGTATCTTAGAGGGAATTTTCAAAGGGTTCGTGGCTCATCAGAATGTGAATCTTTTCATTTGATTGATCCAGAGGGAGACATTGATCAAGAGCTTAGTATTTTCTTTTTCAGGTCAAGCTAG 669 0.4111 MESGVTTVDCHKQVRSWRLLRSFMELLIPTCNCATTIIEEDHEEVISDTCHKISSSKCGSSLITGTIFGYRRGKVSFCIQANANSTNPILLLELAVPTSILAKEMRGGTLRISLESSSGNNNNSSSLLSTPVWTMYCNGRKVGYAVKRRPSNMDYEALRLMRSVVVGTGVMKCKEEEEDDQVMYLRGNFQRVRGSSECESFHLIDPEGDIDQELSIFFFRSS. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06097 222 PANTHER - 4 222 - -
Seca12g06097 222 Pfam Protein of unknown function, DUF617 63 220 IPR006460 GO:0010274
Seca12g06097 222 NCBIfam uncharacterized plant-specific domain TIGR01570 63 221 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06097 Seca-Chr12 152842198 152842866 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06097 - - gmx:100794628 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06097 12 152842198 152842866 Seca4g02068 4 35191805 35192608 PCT